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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   100502191   uncharacterized LOC100502191 
 zma-r.6   100502191   uncharacterized LOC100502191 
 ath-u.5   AT5G62370   Tetratricopeptide repeat (TPR)-like superfamily protein 
 sly-u.5   101265213   pentatricopeptide repeat-containing protein At5g62370 
 vvi-u.5   100248078   pentatricopeptide repeat-containing protein At5g62370 
 ppo-u.5   112328701   pentatricopeptide repeat-containing protein At5g62370-like 
 ppo-u.5   18098101   pentatricopeptide repeat-containing protein At5g62370 

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Top 50 coexpressed genes to 100502191 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100502191 (zma-u.5 coexpression data)

CoexMap"100502191"


zmaLOC100502191 | Entrez gene ID : 100502191    
Species zma ath sly vvi ppo sbi nta mtr osa cre cit bra hvu bdi sot tae bna ghi gma
Paralog 2 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003729 [list] [network] mRNA binding  (346 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4389 genes)  IEA  
Protein NP_001183597.1 [sequence] [blastp]
XP_008673347.1 [sequence] [blastp]
XP_008673348.1 [sequence] [blastp]
XP_020405569.1 [sequence] [blastp]
XP_020405570.1 [sequence] [blastp]
XP_035821921.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cyto 2,  cyto_nucl 2,  plas 1,  extr 1,  vacu 1,  cyto_E.R. 1  (predict for NP_001183597.1)
chlo 4,  chlo_mito 3,  cyto 2,  nucl 1,  cyto_plas 1  (predict for XP_008673347.1)
nucl 2,  cyto 2,  cyto_nucl 2,  plas 1,  extr 1,  vacu 1,  cyto_E.R. 1  (predict for XP_008673348.1)
chlo 4,  chlo_mito 3,  cyto 2,  nucl 1,  cyto_plas 1  (predict for XP_020405569.1)
nucl 2,  cyto 2,  cyto_nucl 2,  plas 1,  extr 1,  vacu 1,  cyto_E.R. 1  (predict for XP_020405570.1)
nucl 2,  cyto 2,  cyto_nucl 2,  plas 1,  extr 1,  vacu 1,  cyto_E.R. 1  (predict for XP_035821921.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for NP_001183597.1)
other 6,  mito 4  (predict for XP_008673347.1)
other 6,  mito 4  (predict for XP_008673348.1)
other 6,  mito 4  (predict for XP_020405569.1)
other 6,  mito 4  (predict for XP_020405570.1)
other 6,  mito 4  (predict for XP_035821921.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
100502191

.
zma-r.6
for
100502191

.
ath-u.5
for
AT5G62370

.
sly-u.5
for
101265213

.
vvi-u.5
for
100248078

.
ppo-u.5
for
112328701

.
ppo-u.5
for
18098101

.


Ortholog ID: 12943
Species ath sly zma bra vvi ppo ghi ghi bna bna sot cit nta nta
Symbol AT5G62370 LOC101265213 LOC100502191 LOC103866712 LOC100248078 LOC18098101 LOC107886167 LOC107949660 LOC106445490 LOC106375647 LOC102601868 LOC102625308 LOC107815729 LOC107771002
Function* Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At5g62370 uncharacterized LOC100502191 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370-like pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 pentatricopeptide repeat-containing protein At5g62370 uncharacterized LOC107815729 uncharacterized LOC107771002
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 2
ppo00230 Purine metabolism 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836358 101265213 100502191 103866712 100248078 18098101 107886167 107949660 106445490 106375647 102601868 102625308 107815729 107771002
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