ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100775964	uncharacterized LOC100775964
gma-r.7	100775964	uncharacterized LOC100775964
gma-u.5	100816897	putative protease
gma-u.5	100808097	uncharacterized LOC100808097
gma-u.5	100779061	uncharacterized LOC100779061
mtr-u.5	11414841	uncharacterized LOC11414841
mtr-u.5	25502130	uncharacterized LOC25502130
ppo-u.5	7458205	uncharacterized LOC7458205
ppo-u.5	7472733	uncharacterized LOC7472733
ath-u.5	AT5G60750	CAAX amino terminal protease family protein
bra-r.6	103851485	uncharacterized LOC103851485
vvi-u.5	100250094	uncharacterized LOC100250094
vvi-u.5	100254162	uncharacterized LOC100254162
ghi-r.1	107950633	uncharacterized LOC107950633
ghi-r.1	107947688	uncharacterized LOC107947688
ghi-r.1	107924394	uncharacterized LOC107924394
bna-r.1	106411316	uncharacterized LOC106411316
bna-r.1	106385140	uncharacterized LOC106385140
cit-r.1	102608238	uncharacterized LOC102608238
sly-u.5	101244021	uncharacterized LOC101244021
sot-r.1	102605715	uncharacterized LOC102605715
nta-r.1	107821891	uncharacterized LOC107821891
nta-r.1	107761747	uncharacterized LOC107761747
osa-u.5	4341126	uncharacterized LOC4341126
zma-u.5	100280096	CAAX amino terminal protease family protein
tae-r.2	123132206	uncharacterized LOC123132206
tae-r.2	123163742	uncharacterized LOC123163742
tae-r.2	123162910	uncharacterized LOC123162910
hvu-r.1	123411629	uncharacterized LOC123411629
hvu-r.1	123403253	uncharacterized LOC123403253
sbi-r.1	8058827	uncharacterized LOC8058827
bdi-r.1	100833844	uncharacterized LOC100833844
cre-r.1	CHLRE_17g712350v5	uncharacterized protein
cre-r.1	CHLRE_07g348750v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0071586 [list] [network] CAAX-box protein processing

(15 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(5894 genes)

IEA

GO MF

GO:0004222 [list] [network] metalloendopeptidase activity

(107 genes)

IEA

Protein

NP_001239773.1 [sequence] [blastp]
XP_040861503.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1, E.R. 1	(predict for NP_001239773.1)
vacu 4, cyto 3, plas 2, cysk 1, cyto_nucl 1, cyto_pero 1, cyto_E.R. 1	(predict for XP_040861503.1)

Subcellular
localization
TargetP

chlo 9	(predict for NP_001239773.1)
other 7	(predict for XP_040861503.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100775964	gma-r.7 for 100775964	gma-u.5 for 100816897	gma-u.5 for 100808097	gma-u.5 for 100779061	mtr-u.5 for 11414841	mtr-u.5 for 25502130	ppo-u.5 for 7458205	ppo-u.5 for 7472733	ath-u.5 for AT5G60750	bra-r.6 for 103851485	vvi-u.5 for 100250094	vvi-u.5 for 100254162	ghi-r.1 for 107950633	ghi-r.1 for 107947688	ghi-r.1 for 107924394	bna-r.1 for 106411316	bna-r.1 for 106385140	cit-r.1 for 102608238	sly-u.5 for 101244021	sot-r.1 for 102605715	nta-r.1 for 107821891	nta-r.1 for 107761747	osa-u.5 for 4341126	zma-u.5 for 100280096	tae-r.2 for 123132206	tae-r.2 for 123163742	tae-r.2 for 123162910	hvu-r.1 for 123411629	hvu-r.1 for 123403253	sbi-r.1 for 8058827	bdi-r.1 for 100833844	cre-r.1 for CHLRE_17g712350v5	cre-r.1 for CHLRE_07g348750v5

Ortholog

Ortholog ID: 5187

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC100775964

putative protease

uncharacterized LOC100779061

uncharacterized LOC11414841

uncharacterized LOC25502130

uncharacterized LOC7458205

uncharacterized LOC7472733

CAAX amino terminal protease family protein

uncharacterized LOC103851485

uncharacterized LOC100250094

uncharacterized LOC100254162

uncharacterized LOC107950633

uncharacterized LOC107947688

uncharacterized LOC107952436

uncharacterized LOC106411316

uncharacterized LOC106385140

uncharacterized LOC102608238

uncharacterized LOC101244021

uncharacterized LOC102605715

uncharacterized LOC107821891

uncharacterized LOC107761747

uncharacterized LOC4341126

CAAX amino terminal protease family protein

uncharacterized LOC123132206

uncharacterized LOC123162910

uncharacterized LOC123143752

uncharacterized LOC123411629

uncharacterized LOC123403253

uncharacterized LOC8058827

uncharacterized LOC100833844

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2
mtr04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00970	Aminoacyl-tRNA biosynthesis	2
ath00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00260	Glycine, serine and threonine metabolism	2
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3
vvi00195	Photosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
bna01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	2
cit01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2
sly04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03040	Spliceosome	3
hvu04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00900	Terpenoid backbone biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

100775964

100816897

100779061

11414841

25502130

7458205

7472733

836196

103851485

100250094

100254162

107950633

107947688

107952436

106411316

106385140

102608238

101244021

102605715

107821891

107761747

4341126

100280096

123132206

123162910

123143752

123411629

123403253

8058827

100833844

66056965

5718160

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100775964 (gma-u.5 coexpression data)

Top 50 enrichment test to 100775964 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	bra	vvi	ghi	bna	cit	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	5	2	2	1	1	2	3	2	1	1	1	2	1	1	3	2	1	1	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100775964 (gma-u.5 coexpression data)

Top 50 enrichment test to 100775964 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**