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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777161   pentatricopeptide repeat-containing protein At2g41080 
 gma-r.7   100777161   pentatricopeptide repeat-containing protein At2g41080 
 mtr-u.5   25493411   pentatricopeptide repeat-containing protein At2g41080 
 ppo-u.5   7469970   pentatricopeptide repeat-containing protein At2g41080 
 ath-u.5   AT2G41080   pentatricopeptide (PPR) repeat protein 
 bra-r.6   103866531   pentatricopeptide repeat-containing protein At2g41080 
 vvi-u.5   100252357   pentatricopeptide repeat-containing protein At2g41080 
 ghi-r.1   107924685   pentatricopeptide repeat-containing protein At2g41080 
 ghi-r.1   107922973   pentatricopeptide repeat-containing protein At2g41080 
 bna-r.1   106391837   pentatricopeptide repeat-containing protein At2g41080-like 
 bna-r.1   106450681   pentatricopeptide repeat-containing protein At2g41080-like 
 sly-u.5   101267037   pentatricopeptide repeat-containing protein At2g41080 
 sot-r.1   102580402   pentatricopeptide repeat-containing protein At2g41080 
 nta-r.1   107821660   pentatricopeptide repeat-containing protein At2g41080-like 
 nta-r.1   107762802   pentatricopeptide repeat-containing protein At2g41080-like 
 osa-u.5   4334566   pentatricopeptide repeat-containing protein At2g41080 
 zma-u.5   100194233   pentatricopeptide repeat-containing protein At2g41080 
 tae-r.2   123079787   pentatricopeptide repeat-containing protein At2g41080 
 tae-r.2   123071448   pentatricopeptide repeat-containing protein At2g41080-like 
 tae-r.2   123062629   pentatricopeptide repeat-containing protein At2g41080 
 hvu-r.1   123444867   pentatricopeptide repeat-containing protein At2g41080 
 sbi-r.1   8056786   pentatricopeptide repeat-containing protein At2g41080 
 bdi-r.1   100830608   pentatricopeptide repeat-containing protein At2g41080 

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Top 50 coexpressed genes to 100777161 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777161 (gma-u.5 coexpression data)

CoexMap"100777161"


gmaLOC100777161 | Entrez gene ID : 100777161      
Species gma mtr ppo ath bra vvi ghi bna sly sot nta osa zma tae hvu sbi bdi cre cit
Paralog 2 1 1 1 1 1 2 2 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003532658.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 1,  nucl 1,  mito 1,  extr 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_003532658.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_003532658.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777161
gma-r.7
for
100777161
mtr-u.5
for
25493411
ppo-u.5
for
7469970
ath-u.5
for
AT2G41080
bra-r.6
for
103866531
vvi-u.5
for
100252357
ghi-r.1
for
107924685
ghi-r.1
for
107922973
bna-r.1
for
106391837
bna-r.1
for
106450681
sly-u.5
for
101267037
sot-r.1
for
102580402
nta-r.1
for
107821660
nta-r.1
for
107762802
osa-u.5
for
4334566
zma-u.5
for
100194233
tae-r.2
for
123079787
tae-r.2
for
123071448
tae-r.2
for
123062629
hvu-r.1
for
123444867
sbi-r.1
for
8056786
bdi-r.1
for
100830608


Ortholog ID: 11272
Species gma mtr ppo ath bra vvi ghi ghi bna bna sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100777161 LOC25493411 LOC7469970 AT2G41080 LOC103866531 LOC100252357 LOC107924685 LOC107922973 LOC106391837 LOC106450681 LOC101267037 LOC102580402 LOC107821660 LOC107762802 LOC4334566 LOC100194233 LOC123079787 LOC123071448 LOC123062629 LOC123444867 LOC8056786 LOC100830608
Function* pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide (PPR) repeat protein pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100777161 25493411 7469970 818707 103866531 100252357 107924685 107922973 106391837 106450681 101267037 102580402 107821660 107762802 4334566 100194233 123079787 123071448 123062629 123444867 8056786 100830608
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