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Orthologous genes in OrthoFinder**

Species Gene Description
 ppo-u.5   7469970   pentatricopeptide repeat-containing protein At2g41080 
 ppo-r.4   7469970   pentatricopeptide repeat-containing protein At2g41080 
 ppo-m.4   7469970   pentatricopeptide repeat-containing protein At2g41080 
 gma-u.5   100777161   pentatricopeptide repeat-containing protein At2g41080 
 mtr-u.5   25493411   pentatricopeptide repeat-containing protein At2g41080 
 ath-u.5   AT2G41080   pentatricopeptide (PPR) repeat protein 
 vvi-u.5   100252357   pentatricopeptide repeat-containing protein At2g41080 
 sly-u.5   101267037   pentatricopeptide repeat-containing protein At2g41080 
 osa-u.5   4334566   pentatricopeptide repeat-containing protein At2g41080 
 zma-u.5   100194233   pentatricopeptide repeat-containing protein At2g41080 

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Top 50 coexpressed genes to 7469970 (ppo-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 7469970 (ppo-u.5 coexpression data)

CoexMap"7469970"


ppoLOC7469970 | Entrez gene ID : 7469970    
Species ppo gma mtr ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (384 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (777 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1480 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4916 genes)  IEA  
Protein XP_002322810.3 [sequence] [blastp]
XP_024442960.2 [sequence] [blastp]
XP_024442962.2 [sequence] [blastp]
XP_024442963.2 [sequence] [blastp]
XP_024442964.2 [sequence] [blastp]
XP_024442965.2 [sequence] [blastp]
XP_024442966.2 [sequence] [blastp]
XP_024442967.2 [sequence] [blastp]
XP_024442969.2 [sequence] [blastp]
XP_024442970.2 [sequence] [blastp]
XP_024442971.2 [sequence] [blastp]
XP_052303763.1 [sequence] [blastp]
XP_052303764.1 [sequence] [blastp]
XP_052303765.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_002322810.3)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442960.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442962.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442963.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442964.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442965.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442966.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442967.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442969.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442970.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_024442971.2)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_052303763.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_052303764.1)
mito 4,  chlo_mito 4,  chlo 4  (predict for XP_052303765.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_002322810.3)
mito 8  (predict for XP_024442960.2)
mito 8  (predict for XP_024442962.2)
mito 8  (predict for XP_024442963.2)
mito 8  (predict for XP_024442964.2)
mito 8  (predict for XP_024442965.2)
mito 8  (predict for XP_024442966.2)
mito 8  (predict for XP_024442967.2)
mito 8  (predict for XP_024442969.2)
mito 8  (predict for XP_024442970.2)
mito 8  (predict for XP_024442971.2)
mito 8  (predict for XP_052303763.1)
mito 8  (predict for XP_052303764.1)
mito 8  (predict for XP_052303765.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ppo-u.5
for
7469970

.
ppo-r.4
for
7469970

.
ppo-m.4
for
7469970

.
gma-u.5
for
100777161

.
mtr-u.5
for
25493411

.
ath-u.5
for
AT2G41080

.
vvi-u.5
for
100252357

.
sly-u.5
for
101267037

.
osa-u.5
for
4334566

.
zma-u.5
for
100194233

.


Ortholog ID: 11272
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot bdi nta nta
Symbol AT2G41080 LOC100777161 LOC101267037 LOC4334566 LOC100194233 LOC103866531 LOC100252357 LOC7469970 LOC25493411 LOC123062629 LOC123079787 LOC123444867 LOC107922973 LOC107924685 LOC106391837 LOC106450681 LOC8056786 LOC102580402 LOC100830608 LOC107821660 LOC107762802
Function* pentatricopeptide (PPR) repeat protein pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080 pentatricopeptide repeat-containing protein At2g41080-like pentatricopeptide repeat-containing protein At2g41080-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00760 Nicotinate and nicotinamide metabolism 2
nta01240 Biosynthesis of cofactors 2
nta03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818707 100777161 101267037 4334566 100194233 103866531 100252357 7469970 25493411 123062629 123079787 123444867 107922973 107924685 106391837 106450681 8056786 102580402 100830608 107821660 107762802
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