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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100777366   AMSH-like ubiquitin thioesterase 1 
 gma-r.7   100777366   AMSH-like ubiquitin thioesterase 1 
 gma-m.5   100777366   AMSH-like ubiquitin thioesterase 1 
 gma-u.5   100804754   AMSH-like ubiquitin thioesterase 1 
 gma-u.5   100806201   AMSH-like ubiquitin thioesterase 1 
 gma-u.5   100806590   AMSH-like ubiquitin thioesterase 3 
 mtr-u.5   11414692   AMSH-like ubiquitin thioesterase 3 
 mtr-u.5   11417013   AMSH-like ubiquitin thioesterase 1 
 mtr-u.5   11423551   AMSH-like ubiquitin thioesterase 1 
 ppo-u.5   7482259   AMSH-like ubiquitin thioesterase 3 
 ppo-u.5   7453881   AMSH-like ubiquitin thioesterase 1 
 ath-u.5   AMSH3   associated molecule with the SH3 domain of STAM 3 
 ath-u.5   AMSH1   associated molecule with the SH3 domain of STAM 1 
 vvi-u.5   100264578   AMSH-like ubiquitin thioesterase 1 
 vvi-u.5   100243131   AMSH-like ubiquitin thioesterase 3 
 sly-u.5   101266109   AMSH-like ubiquitin thioesterase 1 
 sly-u.5   101258096   AMSH-like ubiquitin thioesterase 3 
 osa-u.5   4326798   AMSH-like ubiquitin thioesterase 3 
 osa-u.5   4324542   AMSH-like ubiquitin thioesterase 3 
 zma-u.5   100284313   mov34/MPN/PAD-1 family protein 
 zma-u.5   103650155   AMSH-like ubiquitin thioesterase 3 
 zma-u.5   100283490   mov34/MPN/PAD-1 family protein 

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Top 50 coexpressed genes to 100777366 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100777366 (gma-u.5 coexpression data)

CoexMap"100777366"


gmaLOC100777366 | Entrez gene ID : 100777366      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 3 2 2 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04144 [list] [network] Endocytosis (291 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (10 genes)  IEA  
GO:0071108 [list] [network] protein K48-linked deubiquitination  (12 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (326 genes)  IEA  
GO:0016020 [list] [network] membrane  (5894 genes)  IEA  
GO MF
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (7 genes)  IEA  
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (7 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003534164.1 [sequence] [blastp]
XP_006587501.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto_nucl 2,  mito 2,  chlo 1,  cyto 1,  plas 1,  cyto_mito 1,  golg_plas 1  (predict for XP_003534164.1)
nucl 3,  cyto_nucl 2,  plas 1,  chlo 1,  mito 1,  chlo_mito 1,  golg_plas 1  (predict for XP_006587501.2)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for XP_003534164.1)
other 4,  mito 3  (predict for XP_006587501.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100777366

.
gma-r.7
for
100777366

.
gma-m.5
for
100777366

.
gma-u.5
for
100804754

.
gma-u.5
for
100806201

.
gma-u.5
for
100806590

.
mtr-u.5
for
11414692

.
mtr-u.5
for
11417013

.
mtr-u.5
for
11423551

.
ppo-u.5
for
7482259

.
ppo-u.5
for
7453881

.
ath-u.5
for
AMSH3

.
ath-u.5
for
AMSH1

.
vvi-u.5
for
100264578

.
vvi-u.5
for
100243131

.
sly-u.5
for
101266109

.
sly-u.5
for
101258096

.
osa-u.5
for
4326798

.
osa-u.5
for
4324542

.
zma-u.5
for
100284313

.
zma-u.5
for
103650155

.
zma-u.5
for
100283490

.


Ortholog ID: 2484
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AMSH1 AMSH3 LOC100806201 LOC100800636 LOC101258096 LOC101266109 LOC4326798 LOC4324542 LOC100283490 LOC103650155 LOC103832981 LOC100264578 LOC100243131 LOC7482259 LOC7453881 LOC11423551 LOC11414692 LOC123069782 LOC101290616 LOC123447640 LOC123443613 LOC107924005 LOC107888943 LOC106382086 LOC111216213 LOC8075315 LOC8069597 LOC102588096 LOC102605546 LOC102610196 LOC102628088 LOC100826031 LOC100827373 LOC107760387 LOC107789867
Function* associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3 domain of STAM 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 mov34/MPN/PAD-1 family protein AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 5
ath00190 Oxidative phosphorylation 4
ath04141 Protein processing in endoplasmic reticulum 4
ath04144 Endocytosis 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 4
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 5
ppo04145 Phagosome 5
ppo04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 8
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi04712 Circadian rhythm - plant 6
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03015 mRNA surveillance pathway 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit03022 Basal transcription factors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi01212 Fatty acid metabolism 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00564 Glycerophospholipid metabolism 2
nta00100 Steroid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841301 827303 100806201 100800636 101258096 101266109 4326798 4324542 100283490 103650155 103832981 100264578 100243131 7482259 7453881 11423551 11414692 123069782 101290616 123447640 123443613 107924005 107888943 106382086 111216213 8075315 8069597 102588096 102605546 102610196 102628088 100826031 100827373 107760387 107789867
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