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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   11417013   AMSH-like ubiquitin thioesterase 1 
 mtr-r.5   11417013   AMSH-like ubiquitin thioesterase 1 
 mtr-m.5   11417013   AMSH-like ubiquitin thioesterase 1 
 mtr-u.5   11423551   AMSH-like ubiquitin thioesterase 1 
 mtr-u.5   11414692   AMSH-like ubiquitin thioesterase 3 
 gma-u.5   100804754   AMSH-like ubiquitin thioesterase 1 
 gma-u.5   100806201   AMSH-like ubiquitin thioesterase 1 
 gma-u.5   100777366   AMSH-like ubiquitin thioesterase 1 
 ppo-u.5   7453881   AMSH-like ubiquitin thioesterase 1 
 ppo-u.5   7482259   AMSH-like ubiquitin thioesterase 3 
 ath-u.5   AMSH3   associated molecule with the SH3 domain of STAM 3 
 ath-u.5   AMSH1   associated molecule with the SH3 domain of STAM 1 
 bra-r.6   103832981   AMSH-like ubiquitin thioesterase 1 
 bra-r.6   103871444   AMSH-like ubiquitin thioesterase 1 
 vvi-u.5   100264578   AMSH-like ubiquitin thioesterase 1 
 vvi-u.5   100243131   AMSH-like ubiquitin thioesterase 3 
 ghi-r.1   107892102   AMSH-like ubiquitin thioesterase 3 
 ghi-r.1   107890831   AMSH-like ubiquitin thioesterase 1 
 ghi-r.1   107904665   AMSH-like ubiquitin thioesterase 1 
 bna-r.1   111216213   AMSH-like ubiquitin thioesterase 1 
 bna-r.1   106382086   AMSH-like ubiquitin thioesterase 1 
 bna-r.1   106360512   AMSH-like ubiquitin thioesterase 1 
 cit-r.1   102610196   AMSH-like ubiquitin thioesterase 1 
 cit-r.1   102628088   AMSH-like ubiquitin thioesterase 3 
 sly-u.5   101266109   AMSH-like ubiquitin thioesterase 1 
 sly-u.5   101258096   AMSH-like ubiquitin thioesterase 3 
 sot-r.1   102605546   AMSH-like ubiquitin thioesterase 3 
 sot-r.1   102588096   AMSH-like ubiquitin thioesterase 1 
 nta-r.1   107760387   AMSH-like ubiquitin thioesterase 1 
 nta-r.1   107801828   AMSH-like ubiquitin thioesterase 3 
 nta-r.1   107789867   AMSH-like ubiquitin thioesterase 1 
 osa-u.5   4326798   AMSH-like ubiquitin thioesterase 3 
 osa-u.5   4324542   AMSH-like ubiquitin thioesterase 3 
 zma-u.5   100284313   mov34/MPN/PAD-1 family protein 
 zma-u.5   103650155   AMSH-like ubiquitin thioesterase 3 
 zma-u.5   100283490   mov34/MPN/PAD-1 family protein 
 tae-r.2   123061158   AMSH-like ubiquitin thioesterase 3 
 tae-r.2   123069782   AMSH-like ubiquitin thioesterase 3 
 tae-r.2   123087020   AMSH-like ubiquitin thioesterase 3 
 hvu-r.1   123443613   AMSH-like ubiquitin thioesterase 3 
 hvu-r.1   123447640   AMSH-like ubiquitin thioesterase 3 
 sbi-r.1   8069597   AMSH-like ubiquitin thioesterase 3 
 sbi-r.1   8075315   AMSH-like ubiquitin thioesterase 3 
 bdi-r.1   100827373   AMSH-like ubiquitin thioesterase 3 
 bdi-r.1   100826031   AMSH-like ubiquitin thioesterase 3 

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Top 50 coexpressed genes to 11417013 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 11417013 (mtr-u.5 coexpression data)

CoexMap"11417013"


mtrLOC11417013 | Entrez gene ID : 11417013      
Species mtr gma ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 5 3 2 2 2 2 3 3 2 2 2 3 2 3 3 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG mtr04144 [list] [network] Endocytosis (197 genes)
GO BP
GO:0070536 [list] [network] protein K63-linked deubiquitination  (5 genes)  IEA  
GO:0071108 [list] [network] protein K48-linked deubiquitination  (6 genes)  IEA  
GO CC
GO:0005768 [list] [network] endosome  (135 genes)  IEA  
GO:0016020 [list] [network] membrane  (3455 genes)  IEA  
GO MF
GO:0140492 [list] [network] metal-dependent deubiquitinase activity  (4 genes)  IEA  
GO:0061578 [list] [network] K63-linked deubiquitinase activity  (5 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_003630863.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  pero 1,  cysk 1  (predict for XP_003630863.2)
Subcellular
localization
TargetP
other 8  (predict for XP_003630863.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
11417013
mtr-r.5
for
11417013
mtr-m.5
for
11417013
mtr-u.5
for
11423551
mtr-u.5
for
11414692
gma-u.5
for
100804754
gma-u.5
for
100806201
gma-u.5
for
100777366
ppo-u.5
for
7453881
ppo-u.5
for
7482259
ath-u.5
for
AMSH3
ath-u.5
for
AMSH1
bra-r.6
for
103832981
bra-r.6
for
103871444
vvi-u.5
for
100264578
vvi-u.5
for
100243131
ghi-r.1
for
107892102
ghi-r.1
for
107890831
ghi-r.1
for
107904665
bna-r.1
for
111216213
bna-r.1
for
106382086
bna-r.1
for
106360512
cit-r.1
for
102610196
cit-r.1
for
102628088
sly-u.5
for
101266109
sly-u.5
for
101258096
sot-r.1
for
102605546
sot-r.1
for
102588096
nta-r.1
for
107760387
nta-r.1
for
107801828
nta-r.1
for
107789867
osa-u.5
for
4326798
osa-u.5
for
4324542
zma-u.5
for
100284313
zma-u.5
for
103650155
zma-u.5
for
100283490
tae-r.2
for
123061158
tae-r.2
for
123069782
tae-r.2
for
123087020
hvu-r.1
for
123443613
hvu-r.1
for
123447640
sbi-r.1
for
8069597
sbi-r.1
for
8075315
bdi-r.1
for
100827373
bdi-r.1
for
100826031


Ortholog ID: 2484
Species mtr mtr mtr gma gma ppo ppo ath ath bra bra vvi vvi ghi ghi ghi bna bna bna cit cit sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC11417013 LOC11423551 LOC11414692 LOC100806201 LOC100800636 LOC7453881 LOC7482259 AMSH3 AMSH1 LOC103832981 LOC103871444 LOC100264578 LOC100243131 LOC107924005 LOC107888943 LOC107896640 LOC111216213 LOC106382086 LOC106402943 LOC102610196 LOC102628088 LOC101266109 LOC101258096 LOC102605546 LOC102588096 LOC107760387 LOC107789867 LOC107766216 LOC4326798 LOC4324542 LOC100284313 LOC103650155 LOC100283490 LOC123069782 LOC101290616 LOC123095970 LOC123443613 LOC123447640 LOC8069597 LOC8075315 LOC100827373 LOC100826031
Function* AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 associated molecule with the SH3 domain of STAM 3 associated molecule with the SH3 domain of STAM 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 1 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 mov34/MPN/PAD-1 family protein AMSH-like ubiquitin thioesterase 3 mov34/MPN/PAD-1 family protein AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3 AMSH-like ubiquitin thioesterase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04136 Autophagy - other 2
mtr00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 3
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
gma04518 Integrin signaling 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 5
ppo04145 Phagosome 5
ppo04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
ath03250 Viral life cycle - HIV-1 2
ath03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 5
ath00190 Oxidative phosphorylation 4
ath04141 Protein processing in endoplasmic reticulum 4
ath04144 Endocytosis 3
ath04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
bra03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
bra04141 Protein processing in endoplasmic reticulum 4
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03250 Viral life cycle - HIV-1 2
vvi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi03008 Ribosome biogenesis in eukaryotes 6
ghi04712 Circadian rhythm - plant 6
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03050 Proteasome 3
ghi00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
ghi04075 Plant hormone signal transduction 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
bna04144 Endocytosis 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03420 Nucleotide excision repair 2
cit03022 Basal transcription factors 2
cit03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00030 Pentose phosphate pathway 2
sot01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03015 mRNA surveillance pathway 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta00564 Glycerophospholipid metabolism 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04148 Efferocytosis 4
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03015 mRNA surveillance pathway 3
zma04382 Cornified envelope formation 3
zma04144 Endocytosis 3
zma05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 6
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 8
tae05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 6
tae04136 Autophagy - other 3
tae04144 Endocytosis 3
tae04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 3
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 4
hvu04141 Protein processing in endoplasmic reticulum 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi01212 Fatty acid metabolism 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 11417013 11423551 11414692 100806201 100800636 7453881 7482259 827303 841301 103832981 103871444 100264578 100243131 107924005 107888943 107896640 111216213 106382086 106402943 102610196 102628088 101266109 101258096 102605546 102588096 107760387 107789867 107766216 4326798 4324542 100284313 103650155 100283490 123069782 101290616 123095970 123443613 123447640 8069597 8075315 100827373 100826031
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