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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100779307   indole-3-acetic acid-amido synthetase GH3.3 
 gma-r.7   100779307   indole-3-acetic acid-amido synthetase GH3.3 
 gma-m.5   100779307   indole-3-acetic acid-amido synthetase GH3.3 
 gma-u.5   100776488   probable indole-3-acetic acid-amido synthetase GH3.1 
 gma-u.5   100790923   probable indole-3-acetic acid-amido synthetase GH3.1 
 gma-u.5   GH3   auxin-responsive protein GH3 
 mtr-u.5   25479861   probable indole-3-acetic acid-amido synthetase GH3.1 
 mtr-u.5   11405444   probable indole-3-acetic acid-amido synthetase GH3.1 
 ppo-u.5   18101160   probable indole-3-acetic acid-amido synthetase GH3.1 
 ppo-u.5   7469610   probable indole-3-acetic acid-amido synthetase GH3.1 
 ppo-u.5   7465052   probable indole-3-acetic acid-amido synthetase GH3.1 
 ath-u.5   GH3.1   Auxin-responsive GH3 family protein 
 ath-u.5   GH3.3   Auxin-responsive GH3 family protein 
 ath-u.5   BRU6   Auxin-responsive GH3 family protein 
 vvi-u.5   100250741   probable indole-3-acetic acid-amido synthetase GH3.1 
 vvi-u.5   100250868   probable indole-3-acetic acid-amido synthetase GH3.1 
 sly-u.5   GH3-4   putative indole-3-acetic acid amido synthetase 
 sly-u.5   GH3-3   protein GRETCHEN HAGEN 3-3 
 sly-u.5   GH3.2   indole-3-acetic acid-amido synthetase GH3.2 
 osa-u.5   4326893   probable indole-3-acetic acid-amido synthetase GH3.2 
 zma-u.5   100280445   indole-3-acetic acid amido synthetase 
 zma-u.5   107275219   uncharacterized LOC107275219 
 zma-u.5   100383126   putative indole-3-acetic acid-amido synthetase GH3.1 

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Top 50 coexpressed genes to 100779307 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100779307 (gma-u.5 coexpression data)

CoexMap"100779307"


gmaLOC100779307 | Entrez gene ID : 100779307      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 6 2 3 3 2 3 1 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04075 [list] [network] Plant hormone signal transduction (888 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0016881 [list] [network] acid-amino acid ligase activity  (50 genes)  IEA  
Protein XP_003550026.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4  (predict for XP_003550026.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003550026.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100779307

.
gma-r.7
for
100779307

.
gma-m.5
for
100779307

.
gma-u.5
for
100776488

.
gma-u.5
for
100790923

.
gma-u.5
for
GH3

.
mtr-u.5
for
25479861

.
mtr-u.5
for
11405444

.
ppo-u.5
for
18101160

.
ppo-u.5
for
7469610

.
ppo-u.5
for
7465052

.
ath-u.5
for
GH3.1

.
ath-u.5
for
GH3.3

.
ath-u.5
for
BRU6

.
vvi-u.5
for
100250741

.
vvi-u.5
for
100250868

.
sly-u.5
for
GH3-4

.
sly-u.5
for
GH3-3

.
sly-u.5
for
GH3.2

.
osa-u.5
for
4326893

.
zma-u.5
for
100280445

.
zma-u.5
for
107275219

.
zma-u.5
for
100383126

.


Ortholog ID: 1785
Species ath gma gma sly sly zma zma bra bra vvi vvi ppo ppo mtr mtr tae hvu ghi ghi bna bna sbi sbi sot sot cit cit bdi bdi nta nta
Symbol GH3.1 LOC100776488 LOC100779307 GH3-3 GH3-4 LOC100280445 LOC100383126 LOC103848751 LOC103847985 LOC100250741 LOC100250868 LOC7469610 LOC7465052 LOC11405444 LOC25479861 LOC123044352 LOC123444492 LOC107908866 LOC107922696 LOC111214866 LOC106353688 LOC8072113 LOC8059110 LOC107058985 LOC102600299 LOC102622009 LOC102619738 LOC100826517 LOC100833271 LOC107818015 LOC107780689
Function* Auxin-responsive GH3 family protein probable indole-3-acetic acid-amido synthetase GH3.1 indole-3-acetic acid-amido synthetase GH3.3 protein GRETCHEN HAGEN 3-3 putative indole-3-acetic acid amido synthetase indole-3-acetic acid amido synthetase putative indole-3-acetic acid-amido synthetase GH3.1 indole-3-acetic acid-amido synthetase GH3.2 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 indole-3-acetic acid-amido synthetase GH3.8 probable indole-3-acetic acid-amido synthetase GH3.2 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 indole-3-acetic acid-amido synthetase GH3.2 indole-3-acetic acid-amido synthetase GH3.2 probable indole-3-acetic acid-amido synthetase GH3.2 probable indole-3-acetic acid-amido synthetase GH3.8 indole-3-acetic acid-amido synthetase GH3.3-like probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.1 probable indole-3-acetic acid-amido synthetase GH3.8 probable indole-3-acetic acid-amido synthetase GH3.2 probable indole-3-acetic acid-amido synthetase GH3.1 putative indole-3-acetic acid-amido synthetase GH3.1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 11
gma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
sly00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 11
zma00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04075 Plant hormone signal transduction 2
bra00460 Cyanoamino acid metabolism 2
bra00500 Starch and sucrose metabolism 2
bra00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 7
ppo00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 12
tae00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 9
sbi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 8
sbi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01040 Biosynthesis of unsaturated fatty acids 8
sot01212 Fatty acid metabolism 8
sot00240 Pyrimidine metabolism 2
sot01232 Nucleotide metabolism 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00562 Inositol phosphate metabolism 2
cit04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00480 Glutathione metabolism 2
bdi04075 Plant hormone signal transduction 2
bdi00592 alpha-Linolenic acid metabolism 2
bdi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
bdi00053 Ascorbate and aldarate metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 7
nta00240 Pyrimidine metabolism 4
nta01232 Nucleotide metabolism 4
nta01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 8
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 815985 100776488 100779307 101268544 101251833 100280445 100383126 103848751 103847985 100250741 100250868 7469610 7465052 11405444 25479861 123044352 123444492 107908866 107922696 111214866 106353688 8072113 8059110 107058985 102600299 102622009 102619738 100826517 100833271 107818015 107780689
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