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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780894   DNA polymerase eta 
 gma-r.7   100780894   DNA polymerase eta 
 mtr-u.5   25493444   DNA polymerase eta 
 ppo-u.5   7465359   DNA polymerase eta 
 ath-u.5   POLH   Y-family DNA polymerase H 
 vvi-u.5   100266192   DNA polymerase eta 
 sly-u.5   101257297   DNA polymerase eta 
 osa-u.5   4325305   DNA polymerase eta 
 zma-u.5   103651191   DNA polymerase eta 

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Top 50 coexpressed genes to 100780894 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100780894 (gma-u.5 coexpression data)

CoexMap"100780894"


gmaLOC100780894 | Entrez gene ID : 100780894      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 2 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03460 [list] [network] Fanconi anemia pathway (49 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (6 genes)  IEA  
GO:0009314 [list] [network] response to radiation  (226 genes)  IEA  
GO CC
GO:0035861 [list] [network] site of double-strand break  (13 genes)  IEA  
GO:0005657 [list] [network] replication fork  (143 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (30 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (116 genes)  IEA  
Protein XP_003532665.1 [sequence] [blastp]
XP_006585046.1 [sequence] [blastp]
XP_014634260.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for XP_003532665.1)
nucl 5,  cyto 4,  chlo 1,  cysk 1  (predict for XP_006585046.1)
nucl 8,  mito 1,  plas 1,  cysk 1,  cysk_plas 1,  mito_plas 1  (predict for XP_014634260.3)
Subcellular
localization
TargetP
other 8,  mito 4  (predict for XP_003532665.1)
other 8  (predict for XP_006585046.1)
other 8  (predict for XP_014634260.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780894

.
gma-r.7
for
100780894

.
mtr-u.5
for
25493444

.
ppo-u.5
for
7465359

.
ath-u.5
for
POLH

.
vvi-u.5
for
100266192

.
sly-u.5
for
101257297

.
osa-u.5
for
4325305

.
zma-u.5
for
103651191

.


Ortholog ID: 6671
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol POLH LOC100780894 LOC101257297 LOC4325305 LOC103655706 LOC103827832 LOC100266192 LOC7465359 LOC25493444 LOC123079219 LOC123062100 LOC123444447 LOC107915273 LOC107960652 LOC106391119 LOC106386352 CHLRE_12g524150v5 LOC8075604 LOC102599189 LOC102631204 LOC100821109 LOC107795010 LOC107829874
Function* Y-family DNA polymerase H DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta-like uncharacterized protein DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834503 100780894 101257297 4325305 103655706 103827832 100266192 7465359 25493444 123079219 123062100 123444447 107915273 107960652 106391119 106386352 5722524 8075604 102599189 102631204 100821109 107795010 107829874
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