Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100780965   DNA-directed RNA polymerase III subunit RPC5 
 gma-r.7   100780965   DNA-directed RNA polymerase III subunit RPC5 
 gma-m.5   100780965   DNA-directed RNA polymerase III subunit RPC5 
 mtr-u.5   11409562   DNA-directed RNA polymerase III subunit RPC5 
 ppo-u.5   7478022   uncharacterized LOC7478022 
 ath-u.5   AT5G49530   SIN-like family protein 
 vvi-u.5   100247859   uncharacterized LOC100247859 
 sly-u.5   101256904   uncharacterized LOC101256904 
 sly-u.5   101252245   uncharacterized LOC101252245 
 osa-u.5   9268125   uncharacterized LOC9268125 
 zma-u.5   103653271   uncharacterized LOC103653271 
 zma-u.5   103629388   uncharacterized LOC103629388 

close


Top 50 coexpressed genes to 100780965 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100780965 (gma-u.5 coexpression data)

CoexMap"100780965"


gmaLOC100780965 | Entrez gene ID : 100780965      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03020 [list] [network] RNA polymerase (81 genes)
GO BP
GO:0042797 [list] [network] tRNA transcription by RNA polymerase III  (12 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (45 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
Protein XP_006590438.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1  (predict for XP_006590438.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_006590438.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100780965

.
gma-r.7
for
100780965

.
gma-m.5
for
100780965

.
mtr-u.5
for
11409562

.
ppo-u.5
for
7478022

.
ath-u.5
for
AT5G49530

.
vvi-u.5
for
100247859

.
sly-u.5
for
101256904

.
sly-u.5
for
101252245

.
osa-u.5
for
9268125

.
zma-u.5
for
103653271

.
zma-u.5
for
103629388

.


Ortholog ID: 5391
Species ath gma sly sly osa zma zma bra vvi ppo mtr tae hvu hvu ghi ghi bna cre sbi sot sot cit bdi nta nta
Symbol AT5G49530 LOC100780965 LOC101252245 LOC101256904 LOC9268125 LOC103629388 LOC103653271 LOC103874616 LOC100247859 LOC7478022 LOC11409562 LOC123147886 LOC123407460 LOC123440346 LOC107896374 LOC107913093 LOC106348801 CHLRE_10g454650v5 LOC8076259 LOC102595101 LOC102585686 LOC102618000 LOC100836051 LOC107807280 LOC107790452
Function* SIN-like family protein DNA-directed RNA polymerase III subunit RPC5 uncharacterized LOC101252245 uncharacterized LOC101256904 uncharacterized LOC9268125 uncharacterized LOC103629388 uncharacterized LOC103653271 DNA-directed RNA polymerase III subunit RPC5 uncharacterized LOC100247859 uncharacterized LOC7478022 DNA-directed RNA polymerase III subunit RPC5 uncharacterized LOC123147886 uncharacterized LOC123407460 uncharacterized LOC123440346 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 uncharacterized protein uncharacterized LOC8076259 uncharacterized LOC102595101 DNA-directed RNA polymerase III subunit RPC5-like uncharacterized LOC102618000 uncharacterized LOC100836051 uncharacterized LOC107807280 uncharacterized LOC107790452
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 5
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 4
sly03008 Ribosome biogenesis in eukaryotes 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
bra00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835014 100780965 101252245 101256904 9268125 103629388 103653271 103874616 100247859 7478022 11409562 123147886 123407460 123440346 107896374 107913093 106348801 66055104 8076259 102595101 102585686 102618000 100836051 107807280 107790452
The preparation time of this page was 0.1 [sec].