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Orthologous genes in OrthoFinder**

Species Gene Description
 zma-u.5   103629388   uncharacterized LOC103629388 
 zma-r.6   103629388   uncharacterized LOC103629388 
 zma-u.5   103653271   uncharacterized LOC103653271 
 sbi-r.1   8076259   uncharacterized LOC8076259 
 osa-u.5   9268125   uncharacterized LOC9268125 
 tae-r.2   123147886   uncharacterized LOC123147886 
 hvu-r.1   123407460   uncharacterized LOC123407460 
 hvu-r.1   123440346   uncharacterized LOC123440346 
 bdi-r.1   100836051   uncharacterized LOC100836051 
 ath-u.5   AT5G49530   SIN-like family protein 
 gma-u.5   100780965   DNA-directed RNA polymerase III subunit RPC5 
 sly-u.5   101256904   uncharacterized LOC101256904 
 sly-u.5   101252245   uncharacterized LOC101252245 
 bra-r.6   103874616   DNA-directed RNA polymerase III subunit RPC5 
 vvi-u.5   100247859   uncharacterized LOC100247859 
 ppo-u.5   7478022   uncharacterized LOC7478022 
 mtr-u.5   11409562   DNA-directed RNA polymerase III subunit RPC5 
 ghi-r.1   107913706   DNA-directed RNA polymerase III subunit RPC5 
 ghi-r.1   107913093   DNA-directed RNA polymerase III subunit RPC5 
 ghi-r.1   107896374   DNA-directed RNA polymerase III subunit RPC5 
 bna-r.1   106348801   DNA-directed RNA polymerase III subunit RPC5 
 sot-r.1   102585686   DNA-directed RNA polymerase III subunit RPC5-like 
 sot-r.1   102594031   DNA-directed RNA polymerase III subunit RPC5-like 
 sot-r.1   102595101   uncharacterized LOC102595101 
 cit-r.1   102618000   uncharacterized LOC102618000 
 nta-r.1   107790452   uncharacterized LOC107790452 
 nta-r.1   107829383   uncharacterized LOC107829383 
 nta-r.1   107827193   uncharacterized LOC107827193 
 cre-r.1   CHLRE_10g454650v5   uncharacterized protein 

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Top 50 coexpressed genes to 103629388 (zma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103629388 (zma-u.5 coexpression data)

CoexMap"103629388"


zmaLOC103629388 | Entrez gene ID : 103629388    
Species zma sbi osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 2 1 1 1 2 1 1 1 1 3 1 3 1 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG zma03020 [list] [network] RNA polymerase (74 genes)
GO BP
GO:0042797 [list] [network] tRNA transcription by RNA polymerase III  (12 genes)  IEA  
GO CC
GO:0005666 [list] [network] RNA polymerase III complex  (28 genes)  IEA  
GO:0005634 [list] [network] nucleus  (3371 genes)  IEA  
GO MF
Protein XP_008648747.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 1,  chlo 1,  plas 1,  E.R._vacu 1,  cyto_pero 1  (predict for XP_008648747.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_008648747.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

zma-u.5
for
103629388
zma-r.6
for
103629388
zma-u.5
for
103653271
sbi-r.1
for
8076259
osa-u.5
for
9268125
tae-r.2
for
123147886
hvu-r.1
for
123407460
hvu-r.1
for
123440346
bdi-r.1
for
100836051
ath-u.5
for
AT5G49530
gma-u.5
for
100780965
sly-u.5
for
101256904
sly-u.5
for
101252245
bra-r.6
for
103874616
vvi-u.5
for
100247859
ppo-u.5
for
7478022
mtr-u.5
for
11409562
ghi-r.1
for
107913706
ghi-r.1
for
107913093
ghi-r.1
for
107896374
bna-r.1
for
106348801
sot-r.1
for
102585686
sot-r.1
for
102594031
sot-r.1
for
102595101
cit-r.1
for
102618000
nta-r.1
for
107790452
nta-r.1
for
107829383
nta-r.1
for
107827193
cre-r.1
for
CHLRE_10g454650v5


Ortholog ID: 5391
Species zma zma sbi osa tae tae hvu hvu bdi ath gma sly sly bra vvi ppo mtr ghi ghi ghi bna sot sot sot cit nta nta nta cre
Symbol LOC103629388 LOC103653271 LOC8076259 LOC9268125 LOC123147886 LOC123165063 LOC123407460 LOC123440346 LOC100836051 AT5G49530 LOC100780965 LOC101256904 LOC101252245 LOC103874616 LOC100247859 LOC7478022 LOC11409562 LOC107913706 LOC107913093 LOC107896374 LOC106348801 LOC102585686 LOC102594031 LOC102595101 LOC102618000 LOC107790452 LOC107829383 LOC107807280 CHLRE_10g454650v5
Function* uncharacterized LOC103629388 uncharacterized LOC103653271 uncharacterized LOC8076259 uncharacterized LOC9268125 uncharacterized LOC123147886 uncharacterized LOC123165063 uncharacterized LOC123407460 uncharacterized LOC123440346 uncharacterized LOC100836051 SIN-like family protein DNA-directed RNA polymerase III subunit RPC5 uncharacterized LOC101256904 uncharacterized LOC101252245 DNA-directed RNA polymerase III subunit RPC5 uncharacterized LOC100247859 uncharacterized LOC7478022 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5 DNA-directed RNA polymerase III subunit RPC5-like DNA-directed RNA polymerase III subunit RPC5-like uncharacterized LOC102595101 uncharacterized LOC102618000 uncharacterized LOC107790452 uncharacterized LOC107829383 uncharacterized LOC107807280 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03020 RNA polymerase 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03020 RNA polymerase 5
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03020 RNA polymerase 4
sly03008 Ribosome biogenesis in eukaryotes 4
sly03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
bra00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03008 Ribosome biogenesis in eukaryotes 2
ppo03018 RNA degradation 2
ppo04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03020 RNA polymerase 3
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 3
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 5
sot03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 3
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103629388 103653271 8076259 9268125 123147886 123165063 123407460 123440346 100836051 835014 100780965 101256904 101252245 103874616 100247859 7478022 11409562 107913706 107913093 107896374 106348801 102585686 102594031 102595101 102618000 107790452 107829383 107807280 66055104
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