Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100781103   putative pentatricopeptide repeat-containing protein At1g68930 
 gma-r.7   100781103   putative pentatricopeptide repeat-containing protein At1g68930 
 gma-u.5   100791867   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 mtr-u.5   11424128   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 ppo-u.5   18099341   pentatricopeptide repeat-containing protein At4g21065 
 vvi-u.5   100252407   putative pentatricopeptide repeat-containing protein At5g52630 
 ghi-r.1   107941796   putative pentatricopeptide repeat-containing protein At5g52630 
 cit-r.1   102628893   pentatricopeptide repeat-containing protein At4g21065-like 
 sly-u.5   101265126   pentatricopeptide repeat-containing protein At3g12770-like 
 sot-r.1   102599031   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107771582   putative pentatricopeptide repeat-containing protein At5g52630 
 nta-r.1   107780202   putative pentatricopeptide repeat-containing protein At5g52630 
 osa-u.5   4350519   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 zma-u.5   103652922   putative pentatricopeptide repeat-containing protein At5g52630 
 tae-r.2   123076798   putative pentatricopeptide repeat-containing protein At5g52630 
 tae-r.2   123068239   putative pentatricopeptide repeat-containing protein At5g52630 
 tae-r.2   123059870   putative pentatricopeptide repeat-containing protein At5g52630 
 hvu-r.1   123442497   putative pentatricopeptide repeat-containing protein At5g52630 
 sbi-r.1   110435677   putative pentatricopeptide repeat-containing protein At5g52630 
 bdi-r.1   100842723   putative pentatricopeptide repeat-containing protein At5g52630 

close


Top 50 coexpressed genes to 100781103 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 100781103 (gma-u.5 coexpression data)

CoexMap"100781103"


gmaLOC100781103 | Entrez gene ID : 100781103      
Species gma mtr ppo vvi ghi cit sly sot nta osa zma tae hvu sbi bdi bra cre ath bna
Paralog 3 1 1 1 1 1 1 1 2 1 1 3 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (407 genes)  IEA  
GO CC
GO:0043231 [list] [network] intracellular membrane-bounded organelle  (10455 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003518275.1 [sequence] [blastp]
XP_014624404.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 3  (predict for XP_003518275.1)
extr 4,  nucl 3,  cyto 2,  chlo 1,  vacu 1  (predict for XP_014624404.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_003518275.1)
other 5,  scret 5  (predict for XP_014624404.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100781103
gma-r.7
for
100781103
gma-u.5
for
100791867
mtr-u.5
for
11424128
ppo-u.5
for
18099341
vvi-u.5
for
100252407
ghi-r.1
for
107941796
cit-r.1
for
102628893
sly-u.5
for
101265126
sot-r.1
for
102599031
nta-r.1
for
107771582
nta-r.1
for
107780202
osa-u.5
for
4350519
zma-u.5
for
103652922
tae-r.2
for
123076798
tae-r.2
for
123068239
tae-r.2
for
123059870
hvu-r.1
for
123442497
sbi-r.1
for
110435677
bdi-r.1
for
100842723


Ortholog ID: 12341
Species gma gma mtr ppo vvi ghi cit sly sot nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100781103 LOC100791867 LOC11424128 LOC18099341 LOC100252407 LOC107941796 LOC102628893 LOC101265126 LOC102599031 LOC107771582 LOC107780202 LOC4350519 LOC103652922 LOC123076798 LOC123068239 LOC123059870 LOC123442497 LOC110435677 LOC100842723
Function* putative pentatricopeptide repeat-containing protein At1g68930 pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial pentatricopeptide repeat-containing protein At4g21065 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At3g12770-like putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At5g04780, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo03010 Ribosome 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae02010 ABC transporters 2
tae04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100781103 100791867 11424128 18099341 100252407 107941796 102628893 101265126 102599031 107771582 107780202 4350519 103652922 123076798 123068239 123059870 123442497 110435677 100842723
The preparation time of this page was 1.6 [sec].