Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 nta-r.1   107780202   putative pentatricopeptide repeat-containing protein At5g52630 
 sly-u.5   101265126   pentatricopeptide repeat-containing protein At3g12770-like 
 gma-u.5   100781103   putative pentatricopeptide repeat-containing protein At1g68930 
 gma-u.5   100791867   pentatricopeptide repeat-containing protein At3g24000, mitochondrial 
 vvi-u.5   100252407   putative pentatricopeptide repeat-containing protein At5g52630 
 ppo-u.5   18099341   pentatricopeptide repeat-containing protein At4g21065 
 mtr-u.5   11424128   putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial 
 osa-u.5   4350519   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 zma-u.5   103652922   putative pentatricopeptide repeat-containing protein At5g52630 

close


Top 50 coexpressed genes to 107780202 (nta-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107780202 (nta-r.1 coexpression data)

CoexMap"107780202"


ntaLOC107780202 | Entrez gene ID : 107780202      
Species nta sly gma vvi ppo mtr osa zma bdi hvu bra cit bna ath sbi ghi sot cre tae
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (732 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (2210 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (2607 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7685 genes)  IEA  
Protein XP_016456227.2 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 4,  cyto 3,  chlo 1,  cyto_pero 1,  cyto_plas 1  (predict for XP_016456227.2)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for XP_016456227.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

nta-r.1
for
107780202
sly-u.5
for
101265126
gma-u.5
for
100781103
gma-u.5
for
100791867
vvi-u.5
for
100252407
ppo-u.5
for
18099341
mtr-u.5
for
11424128
osa-u.5
for
4350519
zma-u.5
for
103652922


Ortholog ID: 12341
Species nta nta sly sot gma gma vvi ppo mtr ghi cit osa zma tae tae hvu sbi bdi
Symbol LOC107780202 LOC107771582 LOC101265126 LOC102599031 LOC100781103 LOC100791867 LOC100252407 LOC18099341 LOC11424128 LOC107941796 LOC102628893 LOC4350519 LOC103652922 LOC123068239 LOC123059870 LOC123442497 LOC110435677 LOC100842723
Function* putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At3g12770-like putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At1g68930 pentatricopeptide repeat-containing protein At3g24000, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g21065 putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 pentatricopeptide repeat-containing protein At4g21065-like pentatricopeptide repeat-containing protein At5g04780, mitochondrial putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630 putative pentatricopeptide repeat-containing protein At5g52630
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo03010 Ribosome 3
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107780202 107771582 101265126 102599031 100781103 100791867 100252407 18099341 11424128 107941796 102628893 4350519 103652922 123068239 123059870 123442497 110435677 100842723
The preparation time of this page was 0.1 [sec].