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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100782116   general transcription factor 3C polypeptide 6 
 gma-r.7   100782116   general transcription factor 3C polypeptide 6 
 gma-m.5   100782116   general transcription factor 3C polypeptide 6 
 mtr-u.5   25487364   general transcription factor 3C polypeptide 6 
 ppo-u.5   7460834   uncharacterized LOC7460834 
 ath-u.5   AT3G15420   Transcription factor TFIIIC, tau55-related protein 
 vvi-u.5   100257155   uncharacterized LOC100257155 
 sly-u.5   101251492   uncharacterized LOC101251492 
 osa-u.5   4336478   uncharacterized LOC4336478 
 zma-u.5   103639605   general transcription factor 3C polypeptide 6 
 zma-u.5   100274636   uncharacterized LOC100274636 

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Top 50 coexpressed genes to 100782116 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100782116 (gma-u.5 coexpression data)

CoexMap"100782116"


gmaLOC100782116 | Entrez gene ID : 100782116      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 1 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (50 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (13 genes)  IEA  
GO MF
Protein XP_006594786.1 [sequence] [blastp]
XP_006594787.1 [sequence] [blastp]
XP_006594788.1 [sequence] [blastp]
XP_006594789.1 [sequence] [blastp]
XP_014621416.1 [sequence] [blastp]
XP_014621417.1 [sequence] [blastp]
XP_014621418.1 [sequence] [blastp]
XP_040864350.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  extr 2,  cysk 2,  nucl 1  (predict for XP_006594786.1)
cyto 4,  extr 2,  cysk 2,  nucl 1  (predict for XP_006594787.1)
cyto 4,  extr 2,  cysk 2,  nucl 1  (predict for XP_006594788.1)
cyto 4,  extr 2,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_006594789.1)
cyto 4,  extr 2,  cysk 2,  nucl 1  (predict for XP_014621416.1)
cyto 6,  cysk 1,  chlo 1,  nucl 1,  extr 1,  cysk_plas 1  (predict for XP_014621417.1)
cyto 6,  cysk 1,  chlo 1,  nucl 1,  extr 1,  cysk_plas 1  (predict for XP_014621418.1)
cyto 6,  cysk 1,  chlo 1,  nucl 1,  extr 1,  cysk_plas 1  (predict for XP_040864350.1)
Subcellular
localization
TargetP
other 9  (predict for XP_006594786.1)
other 9  (predict for XP_006594787.1)
other 9  (predict for XP_006594788.1)
other 9  (predict for XP_006594789.1)
other 9  (predict for XP_014621416.1)
other 9  (predict for XP_014621417.1)
other 9  (predict for XP_014621418.1)
other 9  (predict for XP_040864350.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100782116
gma-r.7
for
100782116
gma-m.5
for
100782116
mtr-u.5
for
25487364
ppo-u.5
for
7460834
ath-u.5
for
AT3G15420
vvi-u.5
for
100257155
sly-u.5
for
101251492
osa-u.5
for
4336478
zma-u.5
for
103639605
zma-u.5
for
100274636


Ortholog ID: 4547
Species gma mtr ppo ath vvi ghi ghi bna cit sly sot sot nta nta osa zma zma tae hvu hvu sbi bdi bdi cre
Symbol LOC100782116 LOC25487364 LOC7460834 AT3G15420 LOC100257155 LOC107959597 LOC121209943 LOC106357297 LOC102616613 LOC101251492 LOC102602778 LOC102585379 LOC107816229 LOC107822822 LOC4336478 LOC103639605 LOC100274636 LOC123189820 LOC123445408 LOC123427318 LOC8056039 LOC100833846 LOC100827200 CHLRE_10g440100v5
Function* general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 uncharacterized LOC7460834 Transcription factor TFIIIC, tau55-related protein uncharacterized LOC100257155 general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 uncharacterized LOC106357297 uncharacterized LOC102616613 uncharacterized LOC101251492 general transcription factor 3C polypeptide 6-like uncharacterized LOC102585379 uncharacterized LOC107816229 uncharacterized LOC107822822 uncharacterized LOC4336478 general transcription factor 3C polypeptide 6 uncharacterized LOC100274636 general transcription factor 3C polypeptide 6 uncharacterized LOC123445408 uncharacterized LOC123427318 general transcription factor 3C polypeptide 6 uncharacterized LOC100833846 general transcription factor 3C polypeptide 6 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03018 RNA degradation 3
bna04122 Sulfur relay system 2
bna00190 Oxidative phosphorylation 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 4
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre00710 Carbon fixation by Calvin cycle 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100782116 25487364 7460834 820781 100257155 107959597 121209943 106357297 102616613 101251492 102602778 102585379 107816229 107822822 4336478 103639605 100274636 123189820 123445408 123427318 8056039 100833846 100827200 5715996
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