Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 osa-u.5   4336478   uncharacterized LOC4336478 
 osa-r.6   4336478   uncharacterized LOC4336478 
 osa-m.8   4336478   uncharacterized LOC4336478 
 osa-e.1   4336478   uncharacterized LOC4336478 
 hvu-r.1   123427318   uncharacterized LOC123427318 
 hvu-r.1   123445408   uncharacterized LOC123445408 
 bdi-r.1   100833846   uncharacterized LOC100833846 
 bdi-r.1   100827200   general transcription factor 3C polypeptide 6 
 zma-u.5   103639605   general transcription factor 3C polypeptide 6 
 zma-u.5   100274636   uncharacterized LOC100274636 
 sbi-r.1   8056039   general transcription factor 3C polypeptide 6 
 ath-u.5   AT3G15420   Transcription factor TFIIIC, tau55-related protein 
 gma-u.5   100782116   general transcription factor 3C polypeptide 6 
 sly-u.5   101251492   uncharacterized LOC101251492 
 vvi-u.5   100257155   uncharacterized LOC100257155 
 ppo-u.5   7460834   uncharacterized LOC7460834 
 mtr-u.5   25487364   general transcription factor 3C polypeptide 6 
 ghi-r.1   107926386   general transcription factor 3C polypeptide 6 
 ghi-r.1   107929800   general transcription factor 3C polypeptide 6 
 ghi-r.1   107916665   general transcription factor 3C polypeptide 6 
 sot-r.1   102585379   uncharacterized LOC102585379 
 sot-r.1   102602778   general transcription factor 3C polypeptide 6-like 
 cit-r.1   102616613   uncharacterized LOC102616613 
 nta-r.1   107816229   uncharacterized LOC107816229 
 nta-r.1   107822822   uncharacterized LOC107822822 
 cre-r.1   CHLRE_10g440100v5   uncharacterized protein 

close


Top 50 coexpressed genes to 4336478 (osa-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 4336478 (osa-u.5 coexpression data)

CoexMap"4336478"


osaLOC4336478 | Entrez gene ID : 4336478      
Species osa hvu bdi zma sbi ath gma sly vvi ppo mtr ghi sot cit nta cre tae bna bra
Paralog 4 2 2 2 1 1 1 1 1 1 1 3 2 1 2 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006383 [list] [network] transcription by RNA polymerase III  (27 genes)  IEA  
GO CC
GO:0000127 [list] [network] transcription factor TFIIIC complex  (9 genes)  IEA  
GO MF
Protein NP_001406628.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 3,  mito 3,  extr 2,  cyto_nucl 2  (predict for NP_001406628.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001406628.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

osa-u.5
for
4336478
osa-r.6
for
4336478
osa-m.8
for
4336478
osa-e.1
for
4336478
hvu-r.1
for
123427318
hvu-r.1
for
123445408
bdi-r.1
for
100833846
bdi-r.1
for
100827200
zma-u.5
for
103639605
zma-u.5
for
100274636
sbi-r.1
for
8056039
ath-u.5
for
AT3G15420
gma-u.5
for
100782116
sly-u.5
for
101251492
vvi-u.5
for
100257155
ppo-u.5
for
7460834
mtr-u.5
for
25487364
ghi-r.1
for
107926386
ghi-r.1
for
107929800
ghi-r.1
for
107916665
sot-r.1
for
102585379
sot-r.1
for
102602778
cit-r.1
for
102616613
nta-r.1
for
107816229
nta-r.1
for
107822822
cre-r.1
for
CHLRE_10g440100v5


Ortholog ID: 4547
Species osa tae hvu hvu bdi bdi zma zma sbi ath gma sly vvi ppo mtr ghi ghi ghi bna sot sot cit nta nta cre
Symbol LOC4336478 LOC123189820 LOC123427318 LOC123445408 LOC100833846 LOC100827200 LOC103639605 LOC100274636 LOC8056039 AT3G15420 LOC100782116 LOC101251492 LOC100257155 LOC7460834 LOC25487364 LOC107926386 LOC121209943 LOC107959597 LOC106357297 LOC102585379 LOC102602778 LOC102616613 LOC107816229 LOC107822822 CHLRE_10g440100v5
Function* uncharacterized LOC4336478 general transcription factor 3C polypeptide 6 uncharacterized LOC123427318 uncharacterized LOC123445408 uncharacterized LOC100833846 general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 uncharacterized LOC100274636 general transcription factor 3C polypeptide 6 Transcription factor TFIIIC, tau55-related protein general transcription factor 3C polypeptide 6 uncharacterized LOC101251492 uncharacterized LOC100257155 uncharacterized LOC7460834 general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 general transcription factor 3C polypeptide 6 uncharacterized LOC106357297 uncharacterized LOC102585379 general transcription factor 3C polypeptide 6-like uncharacterized LOC102616613 uncharacterized LOC107816229 uncharacterized LOC107822822 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 3
osa03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03010 Ribosome 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
bdi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 3
ghi03420 Nucleotide excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03018 RNA degradation 3
bna04122 Sulfur relay system 2
bna00190 Oxidative phosphorylation 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 4
nta03020 RNA polymerase 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00620 Pyruvate metabolism 3
cre00710 Carbon fixation by Calvin cycle 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 4336478 123189820 123427318 123445408 100833846 100827200 103639605 100274636 8056039 820781 100782116 101251492 100257155 7460834 25487364 107926386 121209943 107959597 106357297 102585379 102602778 102616613 107816229 107822822 5715996
The preparation time of this page was 0.1 [sec].