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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100784912   beta-amylase 3, chloroplastic 
 gma-r.7   100784912   beta-amylase 3, chloroplastic 
 gma-u.5   BMY2   beta-amylase 
 gma-u.5   100786079   beta-amylase 3, chloroplastic 
 gma-u.5   100781448   beta-amylase 1, chloroplastic 
 mtr-u.5   25493571   beta-amylase 3, chloroplastic 
 mtr-u.5   25497342   beta-amylase 1, chloroplastic 
 mtr-u.5   11439428   beta-amylase 3, chloroplastic 
 ppo-u.5   7475438   beta-amylase 1, chloroplastic 
 ppo-u.5   7494763   beta-amylase 1, chloroplastic 
 ath-u.5   BAM1   beta-amylase 1 
 ath-u.5   CT-BMY   chloroplast beta-amylase 
 vvi-u.5   100261291   beta-amylase 1, chloroplastic 
 vvi-u.5   100247246   beta-amylase 3, chloroplastic 
 vvi-u.5   100242636   beta-amylase 1, chloroplastic 
 sly-u.5   BAM1   beta-amylase 
 sly-u.5   101259175   beta-amylase 3, chloroplastic-like 
 sly-u.5   101253815   beta-amylase 3, chloroplastic 
 osa-u.5   4349417   beta-amylase 3, chloroplastic 
 osa-u.5   4348840   beta-amylase 1, chloroplastic-like 
 osa-u.5   4331577   beta-amylase 2, chloroplastic-like 
 zma-u.5   100281767   uncharacterized LOC100281767 
 zma-u.5   100502394   Beta-amylase 3 chloroplastic 
 zma-u.5   103637673   beta-amylase 3, chloroplastic 

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Top 50 coexpressed genes to 100784912 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100784912 (gma-u.5 coexpression data)

CoexMap"100784912"


gmaLOC100784912 | Entrez gene ID : 100784912      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 5 3 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00500 [list] [network] Starch and sucrose metabolism (292 genes)
GO BP
GO:0000272 [list] [network] polysaccharide catabolic process  (100 genes)  IEA  
GO CC
GO MF
GO:0016161 [list] [network] beta-amylase activity  (19 genes)  IEA  
Protein XP_003539125.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 2,  mito 2,  chlo 1,  mito_plas 1,  cyto_plas 1  (predict for XP_003539125.1)
Subcellular
localization
TargetP
chlo 4,  other 4  (predict for XP_003539125.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100784912
gma-r.7
for
100784912
gma-u.5
for
BMY2
gma-u.5
for
100786079
gma-u.5
for
100781448
mtr-u.5
for
25493571
mtr-u.5
for
25497342
mtr-u.5
for
11439428
ppo-u.5
for
7475438
ppo-u.5
for
7494763
ath-u.5
for
BAM1
ath-u.5
for
CT-BMY
vvi-u.5
for
100261291
vvi-u.5
for
100247246
vvi-u.5
for
100242636
sly-u.5
for
BAM1
sly-u.5
for
101259175
sly-u.5
for
101253815
osa-u.5
for
4349417
osa-u.5
for
4348840
osa-u.5
for
4331577
zma-u.5
for
100281767
zma-u.5
for
100502394
zma-u.5
for
103637673


Ortholog ID: 1176
Species gma gma mtr mtr ppo ppo ath ath bra bra vvi vvi ghi ghi bna bna cit sly sly sot sot nta nta osa osa zma zma tae tae hvu sbi sbi bdi cre
Symbol LOC100784912 BMY2 LOC25493571 LOC11439428 LOC18096911 LOC7494763 CT-BMY BAM1 LOC103860025 LOC103860895 LOC100261291 LOC100242636 LOC107912196 LOC107888905 LOC106437457 LOC125607043 LOC102626673 LOC101259175 LOC101253815 LOC102584887 LOC102577806 LOC107814151 LOC107771686 LOC4331577 LOC4348840 LOC100281141 LOC100502394 LOC123052101 LOC123181646 LOC123449861 LOC8070506 LOC8080586 LOC100827802 CHLRE_06g307150v5
Function* beta-amylase 3, chloroplastic beta-amylase beta-amylase 3, chloroplastic beta-amylase 3, chloroplastic beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic chloroplast beta-amylase beta-amylase 1 beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic-like beta-amylase 1, chloroplastic-like beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic-like beta-amylase 3, chloroplastic beta-amylase 1, chloroplastic beta-amylase PCT-BMYI beta-amylase 3, chloroplastic-like beta-amylase 3, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 1, chloroplastic-like beta-amylase Beta-amylase 3 chloroplastic beta-amylase 3, chloroplastic beta-amylase 3, chloroplastic beta-amylase 2, chloroplastic-like beta-amylase 1, chloroplastic beta-amylase 1, chloroplastic beta-amylase 3, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma00592 alpha-Linolenic acid metabolism 3
gma00640 Propanoate metabolism 2
gma00190 Oxidative phosphorylation 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 5
gma00592 alpha-Linolenic acid metabolism 3
gma00640 Propanoate metabolism 2
gma00190 Oxidative phosphorylation 2
gma00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00730 Thiamine metabolism 2
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
ath04016 MAPK signaling pathway - plant 3
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01240 Biosynthesis of cofactors 3
bra00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
bra00350 Tyrosine metabolism 3
bra00360 Phenylalanine metabolism 3
bra00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 10
ghi00230 Purine metabolism 2
ghi01232 Nucleotide metabolism 2
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00562 Inositol phosphate metabolism 4
bna00740 Riboflavin metabolism 2
bna04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00561 Glycerolipid metabolism 3
sot00280 Valine, leucine and isoleucine degradation 3
sot00100 Steroid biosynthesis 2
sot00564 Glycerophospholipid metabolism 2
sot00565 Ether lipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 9
nta00100 Steroid biosynthesis 3
nta00561 Glycerolipid metabolism 3
nta00564 Glycerophospholipid metabolism 3
nta00565 Ether lipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 5
osa04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 2
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00052 Galactose metabolism 3
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00500 Starch and sucrose metabolism 6
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae01232 Nucleotide metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 5
sbi04075 Plant hormone signal transduction 5
sbi04141 Protein processing in endoplasmic reticulum 2
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 3
sbi04075 Plant hormone signal transduction 3
sbi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100784912 547683 25493571 11439428 18096911 7494763 827419 821975 103860025 103860895 100261291 100242636 107912196 107888905 106437457 125607043 102626673 101259175 101253815 102584887 102577806 107814151 107771686 4331577 4348840 100281141 100502394 123052101 123181646 123449861 8070506 8080586 100827802 5716864
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