ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100787561	60S ribosomal protein L32-1
gma-r.7	100787561	60S ribosomal protein L32-1
gma-u.5	100499946	60S ribosomal protein L32-1
gma-u.5	100527779	uncharacterized LOC100527779
gma-u.5	100802667	60S ribosomal protein L32-1-like
mtr-u.5	11419028	60S ribosomal protein L32-1
mtr-u.5	120577682	60S ribosomal protein L32-1
mtr-u.5	25497470	60S ribosomal protein L32-1
ppo-u.5	7455687	60S ribosomal protein L32-1
ppo-u.5	7459505	60S ribosomal protein L32-1
ppo-u.5	7483593	60S ribosomal protein L32-1
ath-u.5	AT4G18100	Ribosomal protein L32e
ath-u.5	AT5G46430	Ribosomal protein L32e
bra-r.6	103834046	60S ribosomal protein L32-1
bra-r.6	103839605	60S ribosomal protein L32-1
vvi-u.5	100243581	large ribosomal subunit protein eL32z
vvi-u.5	100241158	large ribosomal subunit protein eL32z
ghi-r.1	107912532	60S ribosomal protein L32-1
ghi-r.1	107913148	60S ribosomal protein L32-1
ghi-r.1	107923697	60S ribosomal protein L32-1
bna-r.1	125589829	60S ribosomal protein L32-1-like
bna-r.1	106411507	60S ribosomal protein L32-1
bna-r.1	106411465	60S ribosomal protein L32-1
cit-r.1	102610825	60S ribosomal protein L32-1
cit-r.1	102618355	60S ribosomal protein L32-1
sly-u.5	101253152	large ribosomal subunit protein eL32z
sly-u.5	101254318	large ribosomal subunit protein eL32z
sot-r.1	102580984	60S ribosomal protein L32-1
sot-r.1	102589033	60S ribosomal protein L32-1-like
sot-r.1	102588702	60S ribosomal protein L32-1
nta-r.1	107785823	large ribosomal subunit protein eL32z
nta-r.1	107826407	large ribosomal subunit protein eL32z
nta-r.1	107827982	large ribosomal subunit protein eL32z-like
osa-u.5	9268508	large ribosomal subunit protein eL32z
osa-u.5	4346086	large ribosomal subunit protein eL32z
osa-u.5	4347487	60S ribosomal protein L32-1
zma-u.5	109946017	60S ribosomal protein L32-1
zma-u.5	100282508	60S ribosomal protein L32
zma-u.5	100280220	60S ribosomal protein L32-like
tae-r.2	123112526	60S ribosomal protein L32-1
tae-r.2	123104260	60S ribosomal protein L32-1
tae-r.2	123104263	60S ribosomal protein L32-1
hvu-r.1	123407001	60S ribosomal protein L32-1
hvu-r.1	123399672	60S ribosomal protein L32-1-like
hvu-r.1	123399660	60S ribosomal protein L32-1-like
sbi-r.1	8062414	60S ribosomal protein L32-1
sbi-r.1	8058962	60S ribosomal protein L32-1
sbi-r.1	8058961	60S ribosomal protein L32-1
bdi-r.1	100837015	60S ribosomal protein L32-1
bdi-r.1	100837622	60S ribosomal protein L32-1
bdi-r.1	100837803	60S ribosomal protein L32-1
cre-r.1	CHLRE_06g289550v5	ribosomal protein L32

Top 50 coexpressed genes to 100787561 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100787561 (gma-u.5 coexpression data)

CoexMap"100787561"

[Cytoscape]

Annotation

functional annotation

KEGG

gmx03010 [list] [network] Ribosome (1072 genes)

GO BP

GO:0006412 [list] [network] translation

(852 genes)

IEA

GO CC

GO:0022625 [list] [network] cytosolic large ribosomal subunit	(230 genes)	IEA
GO:0005840 [list] [network] ribosome	(633 genes)	IEA

GO MF

GO:0003735 [list] [network] structural constituent of ribosome

(610 genes)

IEA

Protein

XP_003538445.3 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 2, mito 1, cyto_nucl 1

(predict for XP_003538445.3)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_003538445.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100787561	gma-r.7 for 100787561	gma-u.5 for 100499946	gma-u.5 for 100527779	gma-u.5 for 100802667	mtr-u.5 for 11419028	mtr-u.5 for 120577682	mtr-u.5 for 25497470	ppo-u.5 for 7455687	ppo-u.5 for 7459505	ppo-u.5 for 7483593	ath-u.5 for AT4G18100	ath-u.5 for AT5G46430	bra-r.6 for 103834046	bra-r.6 for 103839605	vvi-u.5 for 100243581	vvi-u.5 for 100241158	ghi-r.1 for 107912532	ghi-r.1 for 107913148	ghi-r.1 for 107923697	bna-r.1 for 125589829	bna-r.1 for 106411507	bna-r.1 for 106411465	cit-r.1 for 102610825	cit-r.1 for 102618355	sly-u.5 for 101253152	sly-u.5 for 101254318	sot-r.1 for 102580984	sot-r.1 for 102589033	sot-r.1 for 102588702	nta-r.1 for 107785823	nta-r.1 for 107826407	nta-r.1 for 107827982	osa-u.5 for 9268508	osa-u.5 for 4346086	osa-u.5 for 4347487	zma-u.5 for 109946017	zma-u.5 for 100282508	zma-u.5 for 100280220	tae-r.2 for 123112526	tae-r.2 for 123104260	tae-r.2 for 123104263	hvu-r.1 for 123407001	hvu-r.1 for 123399672	hvu-r.1 for 123399660	sbi-r.1 for 8062414	sbi-r.1 for 8058962	sbi-r.1 for 8058961	bdi-r.1 for 100837015	bdi-r.1 for 100837622	bdi-r.1 for 100837803	cre-r.1 for CHLRE_06g289550v5

Ortholog

Ortholog ID: 961

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

60S ribosomal protein L32-1

60S ribosomal protein L32-1-like

60S ribosomal protein L32-1

Ribosomal protein L32e

60S ribosomal protein L32-1