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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100788852   putative clathrin assembly protein At4g40080 
 gma-r.7   100788852   putative clathrin assembly protein At4g40080 
 gma-u.5   100804881   putative clathrin assembly protein At4g40080 
 gma-u.5   100777164   putative clathrin assembly protein At4g40080 
 gma-u.5   100808393   putative clathrin assembly protein At4g40080 
 mtr-u.5   11433785   putative clathrin assembly protein At4g40080 
 mtr-u.5   11419971   putative clathrin assembly protein At4g40080 
 mtr-u.5   25501858   putative clathrin assembly protein At4g40080 
 ppo-u.5   7468879   putative clathrin assembly protein At4g40080 
 ath-u.5   AT5G10410   ENTH/ANTH/VHS superfamily protein 
 vvi-u.5   100242023   putative clathrin assembly protein At4g40080 
 vvi-u.5   100241671   putative clathrin assembly protein At4g40080 
 sly-u.5   101265698   putative clathrin assembly protein At4g40080 
 sly-u.5   101268757   putative clathrin assembly protein At4g40080 
 osa-u.5   9267864   putative clathrin assembly protein At4g40080 
 zma-u.5   100191277   clathrin assembly protein 

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Top 50 coexpressed genes to 100788852 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100788852 (gma-u.5 coexpression data)

CoexMap"100788852"


gmaLOC100788852 | Entrez gene ID : 100788852      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 5 3 1 1 2 2 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048268 [list] [network] clathrin coat assembly  (31 genes)  IEA  
GO:0072583 [list] [network] clathrin-dependent endocytosis  (61 genes)  IEA  
GO:0006900 [list] [network] vesicle budding from membrane  (72 genes)  IEA  
GO CC
GO:0005905 [list] [network] clathrin-coated pit  (51 genes)  IEA  
GO:0030136 [list] [network] clathrin-coated vesicle  (75 genes)  IEA  
GO MF
GO:0005545 [list] [network] 1-phosphatidylinositol binding  (31 genes)  IEA  
GO:0032050 [list] [network] clathrin heavy chain binding  (38 genes)  IEA  
GO:0005546 [list] [network] phosphatidylinositol-4,5-bisphosphate binding  (82 genes)  IEA  
GO:0000149 [list] [network] SNARE binding  (141 genes)  IEA  
Protein XP_003526565.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 1  (predict for XP_003526565.1)
Subcellular
localization
TargetP
mito 8  (predict for XP_003526565.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100788852

.
gma-r.7
for
100788852

.
gma-u.5
for
100804881

.
gma-u.5
for
100777164

.
gma-u.5
for
100808393

.
mtr-u.5
for
11433785

.
mtr-u.5
for
11419971

.
mtr-u.5
for
25501858

.
ppo-u.5
for
7468879

.
ath-u.5
for
AT5G10410

.
vvi-u.5
for
100242023

.
vvi-u.5
for
100241671

.
sly-u.5
for
101265698

.
sly-u.5
for
101268757

.
osa-u.5
for
9267864

.
zma-u.5
for
100191277

.


Ortholog ID: 3134
Species ath gma gma sly sly osa zma bra vvi vvi ppo mtr mtr tae hvu bna bna sot cit cit bdi nta nta
Symbol AT5G10410 LOC100804881 LOC100788852 LOC101268757 LOC101265698 LOC9267864 LOC100191277 LOC103846808 LOC100241671 LOC100242023 LOC7468879 LOC11433785 LOC11419971 LOC123107183 LOC123444737 LOC106405686 LOC125583933 LOC102583980 LOC102613248 LOC102628181 LOC100836899 LOC107787328 LOC107795824
Function* ENTH/ANTH/VHS superfamily protein putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 clathrin assembly protein putative clathrin assembly protein At5g10410 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 uncharacterized LOC123444737 putative clathrin assembly protein At5g10410 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080 putative clathrin assembly protein At4g40080
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
ath04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 4
zma04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830905 100804881 100788852 101268757 101265698 9267864 100191277 103846808 100241671 100242023 7468879 11433785 11419971 123107183 123444737 106405686 125583933 102583980 102613248 102628181 100836899 107787328 107795824
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