ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
gma-u.5	100789884	somatic embryogenesis receptor kinase 2
gma-r.7	100789884	somatic embryogenesis receptor kinase 2
gma-u.5	100804180	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
gma-u.5	100800522	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
gma-u.5	100305355	somatic embryogenesis receptor-like kinase-like protein
mtr-u.5	25485006	somatic embryogenesis receptor kinase 2
mtr-u.5	11421599	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
ppo-u.5	7457126	somatic embryogenesis receptor kinase 2
ppo-u.5	18104501	somatic embryogenesis receptor kinase 2
ppo-u.5	7475818	somatic embryogenesis receptor kinase 2
ath-u.5	SERK1	somatic embryogenesis receptor-like kinase 1
ath-u.5	SERK4	somatic embryogenesis receptor-like kinase 4
ath-u.5	SERK5	somatic embryogenesis receptor-like kinase 5
bra-r.6	LRRII6	somatic embryogenesis receptor kinase 1
bra-r.6	103834483	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
bra-r.6	103862237	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
vvi-u.5	100247340	LRR receptor kinase BAK1
vvi-u.5	100253855	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
vvi-u.5	100266543	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
ghi-r.1	107889821	somatic embryogenesis receptor kinase 1
ghi-r.1	107898915	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
ghi-r.1	107899575	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
bna-r.1	106405819	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
bna-r.1	106354174	somatic embryogenesis receptor kinase 1
bna-r.1	106361098	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
cit-r.1	SERK	somatic embryogenesis receptor-like kinase
cit-r.1	102608011	LRR receptor kinase SERK2-like
cit-r.1	102619576	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
sly-u.5	SERK3A	somatic embryogenesis receptor kinase 3A
sly-u.5	SERK1	somatic embryogenesis receptor kinase 1
sly-u.5	SERK3B	somatic embryogenesis receptor kinase 3B
sot-r.1	102589350	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
sot-r.1	SERK3	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
sot-r.1	SERK1	somatic embryogenesis receptor-like kinase 1
nta-r.1	107830517	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
nta-r.1	107760318	somatic embryogenesis receptor kinase 2
nta-r.1	107767522	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
osa-u.5	4344785	LRR receptor kinase BAK1-like
osa-u.5	4336035	LRR receptor kinase SERK2-like
zma-u.5	542015	somatic embryogenesis receptor-like kinase 1
zma-u.5	542016	somatic embryogenesis receptor-like kinase 2
zma-u.5	542670	somatic embryogenesis receptor-like kinase 3
tae-r.2	123163980	LRR receptor kinase BAK1
tae-r.2	123045646	LRR receptor kinase SERK2
tae-r.2	123144620	LRR receptor kinase SERK2
hvu-r.1	123426894	LRR receptor kinase SERK2
hvu-r.1	123404932	LRR receptor kinase SERK2-like
hvu-r.1	123413632	LRR receptor kinase BAK1
sbi-r.1	8073419	LRR receptor kinase BAK1
sbi-r.1	8080895	LRR receptor kinase BAK1
sbi-r.1	8070545	LRR receptor kinase BAK1
bdi-r.1	100837196	LRR receptor kinase SERK2
bdi-r.1	100843313	LRR receptor kinase SERK2
bdi-r.1	100834508	LRR receptor kinase BAK1

Top 50 coexpressed genes to 100789884 (gma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 100789884 (gma-u.5 coexpression data)

CoexMap"100789884"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(2192 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(2253 genes)	IEA
GO:0005524 [list] [network] ATP binding	(3753 genes)	IEA
GO:0005515 [list] [network] protein binding	(7243 genes)	IEA

Protein

XP_003556185.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 7, cyto 1, E.R. 1, cyto_E.R. 1

(predict for XP_003556185.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_003556185.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100789884	gma-r.7 for 100789884	gma-u.5 for 100804180	gma-u.5 for 100800522	gma-u.5 for 100305355	mtr-u.5 for 25485006	mtr-u.5 for 11421599	ppo-u.5 for 7457126	ppo-u.5 for 18104501	ppo-u.5 for 7475818	ath-u.5 for SERK1	ath-u.5 for SERK4	ath-u.5 for SERK5	bra-r.6 for LRRII6	bra-r.6 for 103834483	bra-r.6 for 103862237	vvi-u.5 for 100247340	vvi-u.5 for 100253855	vvi-u.5 for 100266543	ghi-r.1 for 107889821	ghi-r.1 for 107898915	ghi-r.1 for 107899575	bna-r.1 for 106405819	bna-r.1 for 106354174	bna-r.1 for 106361098	cit-r.1 for SERK	cit-r.1 for 102608011	cit-r.1 for 102619576	sly-u.5 for SERK3A	sly-u.5 for SERK1	sly-u.5 for SERK3B	sot-r.1 for 102589350	sot-r.1 for SERK3	sot-r.1 for SERK1	nta-r.1 for 107830517	nta-r.1 for 107760318	nta-r.1 for 107767522	osa-u.5 for 4344785	osa-u.5 for 4336035	zma-u.5 for 542015	zma-u.5 for 542016	zma-u.5 for 542670	tae-r.2 for 123163980	tae-r.2 for 123045646	tae-r.2 for 123144620	hvu-r.1 for 123426894	hvu-r.1 for 123404932	hvu-r.1 for 123413632	sbi-r.1 for 8073419	sbi-r.1 for 8080895	sbi-r.1 for 8070545	bdi-r.1 for 100837196	bdi-r.1 for 100843313	bdi-r.1 for 100834508

Ortholog

Ortholog ID: 1164

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

SERK4

BAK1

SERK2

LRRII6

SERK

SERK3A

SERK1

SERK3B

LOC102589350

SERK3

SERK1

Function^*

BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1

somatic embryogenesis receptor kinase 2

BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1

somatic embryogenesis receptor kinase 2