ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sot-r.1	SERK1	somatic embryogenesis receptor-like kinase 1
sot-r.1	SERK3	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
sot-r.1	102589350	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
sly-u.5	SERK3A	somatic embryogenesis receptor kinase 3A
sly-u.5	SERK1	somatic embryogenesis receptor kinase 1
sly-u.5	SERK3B	somatic embryogenesis receptor kinase 3B
nta-r.1	107830517	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
nta-r.1	107760318	somatic embryogenesis receptor kinase 2
nta-r.1	107767522	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
ath-u.5	BAK1	BRI1-associated receptor kinase
ath-u.5	SERK1	somatic embryogenesis receptor-like kinase 1
ath-u.5	SERK4	somatic embryogenesis receptor-like kinase 4
gma-u.5	100305355	somatic embryogenesis receptor-like kinase-like protein
gma-u.5	100789884	somatic embryogenesis receptor kinase 2
gma-u.5	100800522	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
bra-r.6	103830829	somatic embryogenesis receptor kinase 1
bra-r.6	103862237	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
bra-r.6	LRRII6	somatic embryogenesis receptor kinase 1
vvi-u.5	100247683	somatic embryogenesis receptor kinase-like
vvi-u.5	100247340	LRR receptor kinase BAK1
vvi-u.5	100266543	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
ppo-u.5	7457126	somatic embryogenesis receptor kinase 2
ppo-u.5	7486331	somatic embryogenesis receptor kinase 1
ppo-u.5	18104501	somatic embryogenesis receptor kinase 2
mtr-u.5	25485006	somatic embryogenesis receptor kinase 2
mtr-u.5	11421599	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
ghi-r.1	107889821	somatic embryogenesis receptor kinase 1
ghi-r.1	107898915	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
ghi-r.1	107899575	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
bna-r.1	106411181	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
bna-r.1	106354174	somatic embryogenesis receptor kinase 1
bna-r.1	106368734	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1
cit-r.1	SERK	somatic embryogenesis receptor-like kinase
cit-r.1	102619576	BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
cit-r.1	102608011	LRR receptor kinase SERK2-like
osa-u.5	4344785	LRR receptor kinase BAK1-like
osa-u.5	4336035	LRR receptor kinase SERK2-like
zma-u.5	542015	somatic embryogenesis receptor-like kinase 1
zma-u.5	542016	somatic embryogenesis receptor-like kinase 2
zma-u.5	542670	somatic embryogenesis receptor-like kinase 3
tae-r.2	123163980	LRR receptor kinase BAK1
tae-r.2	123189411	LRR receptor kinase SERK2
tae-r.2	123137117	LRR receptor kinase SERK2
hvu-r.1	123413632	LRR receptor kinase BAK1
hvu-r.1	123426894	LRR receptor kinase SERK2
hvu-r.1	123404932	LRR receptor kinase SERK2-like
sbi-r.1	8080895	LRR receptor kinase BAK1
sbi-r.1	8073419	LRR receptor kinase BAK1
sbi-r.1	8070545	LRR receptor kinase BAK1
bdi-r.1	100834508	LRR receptor kinase BAK1
bdi-r.1	100837196	LRR receptor kinase SERK2
bdi-r.1	100843313	LRR receptor kinase SERK2

Top 50 coexpressed genes to SERK1 (sot-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to SERK1 (sot-r.1 coexpression data)

CoexMap"102577852"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006468 [list] [network] protein phosphorylation

(1236 genes)

IEA

GO CC

GO MF

GO:0004672 [list] [network] protein kinase activity	(1270 genes)	IEA
GO:0005524 [list] [network] ATP binding	(2117 genes)	IEA
GO:0005515 [list] [network] protein binding	(4214 genes)	IEA

Protein

NP_001275293.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 9, vacu 1, E.R. 1, E.R._vacu 1

(predict for NP_001275293.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_001275293.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sot-r.1 for SERK1	sot-r.1 for SERK3	sot-r.1 for 102589350	sly-u.5 for SERK3A	sly-u.5 for SERK1	sly-u.5 for SERK3B	nta-r.1 for 107830517	nta-r.1 for 107760318	nta-r.1 for 107767522	ath-u.5 for BAK1	ath-u.5 for SERK1	ath-u.5 for SERK4	gma-u.5 for 100305355	gma-u.5 for 100789884	gma-u.5 for 100800522	bra-r.6 for 103830829	bra-r.6 for 103862237	bra-r.6 for LRRII6	vvi-u.5 for 100247683	vvi-u.5 for 100247340	vvi-u.5 for 100266543	ppo-u.5 for 7457126	ppo-u.5 for 7486331	ppo-u.5 for 18104501	mtr-u.5 for 25485006	mtr-u.5 for 11421599	ghi-r.1 for 107889821	ghi-r.1 for 107898915	ghi-r.1 for 107899575	bna-r.1 for 106411181	bna-r.1 for 106354174	bna-r.1 for 106368734	cit-r.1 for SERK	cit-r.1 for 102619576	cit-r.1 for 102608011	osa-u.5 for 4344785	osa-u.5 for 4336035	zma-u.5 for 542015	zma-u.5 for 542016	zma-u.5 for 542670	tae-r.2 for 123163980	tae-r.2 for 123189411	tae-r.2 for 123137117	hvu-r.1 for 123413632	hvu-r.1 for 123426894	hvu-r.1 for 123404932	sbi-r.1 for 8080895	sbi-r.1 for 8073419	sbi-r.1 for 8070545	bdi-r.1 for 100834508	bdi-r.1 for 100837196	bdi-r.1 for 100843313

Ortholog

Ortholog ID: 1164

Species

sot

sly

nta

ath

gma

bra

vvi

ppo

mtr

ghi

bna

cit

osa

zma

tae

hvu

sbi

bdi

Symbol

SERK1

SERK3

LOC102589350

SERK3A

SERK1

SERK3B

LOC107760318

LOC107779702

LOC107825933

BAK1

SERK4

SERK2

LRRII6

SERK

Function^*

somatic embryogenesis receptor-like kinase 1

BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like

somatic embryogenesis receptor kinase 3A

somatic embryogenesis receptor kinase 1

somatic embryogenesis receptor kinase 3B

somatic embryogenesis receptor kinase 2

somatic embryogenesis receptor kinase 2-like