ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100793552	arginine decarboxylase
gma-r.7	100793552	arginine decarboxylase
gma-u.5	ADC	arginine decarboxylase
mtr-u.5	11438086	arginine decarboxylase
ppo-u.5	7453603	arginine decarboxylase
ath-u.5	ADC1	arginine decarboxylase 1
ath-u.5	ADC2	arginine decarboxylase 2
vvi-u.5	100233080	arginine decarboxylase
sly-u.5	adc1	arginine decarboxylase
sly-u.5	ADC	arginine decarboxylase
osa-u.5	4340008	arginine decarboxylase 1-like
zma-u.5	103638134	arginine decarboxylase 1

functional annotation

KEGG

gmx00330 [list] [network] Arginine and proline metabolism (121 genes)

GO BP

GO:0006527 [list] [network] L-arginine catabolic process	(6 genes)	IEA
GO:0008295 [list] [network] spermidine biosynthetic process	(11 genes)	IEA

GO CC

GO MF

GO:0008792 [list] [network] arginine decarboxylase activity

(2 genes)

IEA

Protein

XP_003522832.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, nucl 1, plas 1, pero 1, cysk_nucl 1, E.R._vacu 1

(predict for XP_003522832.1)

Subcellular
localization
TargetP

scret 3, other 3

(predict for XP_003522832.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100793552	gma-r.7 for 100793552	gma-u.5 for ADC	mtr-u.5 for 11438086	ppo-u.5 for 7453603	ath-u.5 for ADC1	ath-u.5 for ADC2	vvi-u.5 for 100233080	sly-u.5 for adc1	sly-u.5 for ADC	osa-u.5 for 4340008	zma-u.5 for 103638134

Ortholog ID: 4514

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

LOC100793552

ADC

LOC11438086

LOC7453603

ADC1

ADC2

adc1

ADC

Function^*

arginine decarboxylase

arginine decarboxylase 1

arginine decarboxylase 2

arginine decarboxylase

arginine decarboxylase 2-like

arginine decarboxylase 2

arginine decarboxylase

arginine decarboxylase 1B, chloroplastic

arginine decarboxylase-like

arginine decarboxylase 1-like

arginine decarboxylase 1

arginine decarboxylase 1-like

arginine decarboxylase 1

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	4
gma00330	Arginine and proline metabolism	4
gma00020	Citrate cycle (TCA cycle)	2
gma00566	Sulfoquinovose metabolism	2
gma00620	Pyruvate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00330	Arginine and proline metabolism	4
gma00270	Cysteine and methionine metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04016	MAPK signaling pathway - plant	4
mtr04626	Plant-pathogen interaction	2
mtr00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00330	Arginine and proline metabolism	3
ppo00052	Galactose metabolism	2
ppo00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath04146	Peroxisome	3
ath00330	Arginine and proline metabolism	3
ath00052	Galactose metabolism	2
ath00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00220	Arginine biosynthesis	2
vvi00250	Alanine, aspartate and glutamate metabolism	2
vvi00910	Nitrogen metabolism	2
vvi01200	Carbon metabolism	2
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00330	Arginine and proline metabolism	4
ghi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	7
bna00190	Oxidative phosphorylation	2
bna00910	Nitrogen metabolism	2
bna01310	Nitrogen cycle	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00330	Arginine and proline metabolism	7
bna00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00330	Arginine and proline metabolism	4
sly04626	Plant-pathogen interaction	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00330	Arginine and proline metabolism	5
sly00940	Phenylpropanoid biosynthesis	4
sly00270	Cysteine and methionine metabolism	3
sly01230	Biosynthesis of amino acids	3
sly00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00330	Arginine and proline metabolism	3
sot00130	Ubiquinone and other terpenoid-quinone biosynthesis	3
sot00630	Glyoxylate and dicarboxylate metabolism	2
sot00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00330	Arginine and proline metabolism	4
sot00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
sot01230	Biosynthesis of amino acids	3
sot00360	Phenylalanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00330	Arginine and proline metabolism	4
nta00410	beta-Alanine metabolism	2
nta00620	Pyruvate metabolism	2
nta00710	Carbon fixation by Calvin cycle	2
nta01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	6
nta01230	Biosynthesis of amino acids	6
nta00330	Arginine and proline metabolism	4
nta00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01200	Carbon metabolism	6
zma00020	Citrate cycle (TCA cycle)	5
zma00190	Oxidative phosphorylation	3
zma01210	2-Oxocarboxylic acid metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	3
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00330	Arginine and proline metabolism	3
tae03060	Protein export	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	7
hvu00360	Phenylalanine metabolism	5
hvu00400	Phenylalanine, tyrosine and tryptophan biosynthesis	3
hvu01230	Biosynthesis of amino acids	3
hvu00130	Ubiquinone and other terpenoid-quinone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00230	Purine metabolism	2
sbi00250	Alanine, aspartate and glutamate metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

100793552

548071

11438086

7453603

816149

829623

103834394

103862369

100233080

107949089

107893794

106352939

106428764

102608169

543807

543960

102600980

102596487

107759371

107796783

4340008

103638134

100682517

123120950

123413577

8068388

100831880

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100793552 (gma-u.5 coexpression data)

Top 50 enrichment test to 100793552 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	1	1	2	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100793552 (gma-u.5 coexpression data)

Top 50 enrichment test to 100793552 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**