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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100795306   DNA polymerase alpha subunit B 
 gma-r.7   100795306   DNA polymerase alpha subunit B 
 gma-u.5   100797769   DNA polymerase alpha subunit B 
 mtr-u.5   11441066   DNA polymerase alpha subunit B 
 ppo-u.5   18102432   uncharacterized LOC18102432 
 ath-u.5   POLA2   DNA polymerase alpha 2 
 vvi-u.5   100257984   uncharacterized LOC100257984 
 sly-u.5   101259745   uncharacterized LOC101259745 
 osa-u.5   4351872   uncharacterized LOC4351872 
 zma-u.5   100191506   uncharacterized LOC100191506 

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Top 50 coexpressed genes to 100795306 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100795306 (gma-u.5 coexpression data)

CoexMap"100795306"


gmaLOC100795306 | Entrez gene ID : 100795306      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03030 [list] [network] DNA replication (69 genes)
GO BP
GO:0006270 [list] [network] DNA replication initiation  (37 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (6 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003537544.1 [sequence] [blastp]
XP_006591473.1 [sequence] [blastp]
XP_014619758.1 [sequence] [blastp]
XP_040862886.1 [sequence] [blastp]
XP_040862887.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3  (predict for XP_003537544.1)
cyto 6,  nucl 3  (predict for XP_006591473.1)
cyto 6,  nucl 3  (predict for XP_014619758.1)
cyto 6,  nucl 2,  vacu 1  (predict for XP_040862886.1)
cyto 6,  nucl 2,  vacu 1  (predict for XP_040862887.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003537544.1)
other 9  (predict for XP_006591473.1)
other 9  (predict for XP_014619758.1)
other 9  (predict for XP_040862886.1)
other 9  (predict for XP_040862887.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100795306

.
gma-r.7
for
100795306

.
gma-u.5
for
100797769

.
mtr-u.5
for
11441066

.
ppo-u.5
for
18102432

.
ath-u.5
for
POLA2

.
vvi-u.5
for
100257984

.
sly-u.5
for
101259745

.
osa-u.5
for
4351872

.
zma-u.5
for
100191506

.


Ortholog ID: 9869
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sbi sot cit bdi nta nta
Symbol POLA2 LOC100797769 LOC100795306 LOC101259745 LOC4351872 LOC100191506 LOC103852416 LOC100257984 LOC18102432 LOC11441066 LOC123167329 LOC123148975 LOC123409959 LOC107903900 LOC107898021 LOC106392198 LOC106391223 CHLRE_01g017450v5 LOC8061214 LOC8061510 LOC102588311 LOC102617108 LOC100844321 LOC107831849 LOC107823792
Function* DNA polymerase alpha 2 DNA polymerase alpha subunit B DNA polymerase alpha subunit B uncharacterized LOC101259745 uncharacterized LOC4351872 uncharacterized LOC100191506 DNA polymerase alpha subunit B uncharacterized LOC100257984 uncharacterized LOC18102432 DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B-like DNA polymerase alpha subunit B uncharacterized protein DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B uncharacterized LOC102617108 DNA polymerase alpha subunit B uncharacterized LOC107831849 uncharacterized LOC107823792
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 9
gma03430 Mismatch repair 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 10
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 10
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 11
sbi03420 Nucleotide excision repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 11
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot02010 ABC transporters 2
sot03460 Fanconi anemia pathway 2
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 4
cit03410 Base excision repair 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 9
bdi03440 Homologous recombination 4
bdi03430 Mismatch repair 3
bdi03420 Nucleotide excision repair 2
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843086 100797769 100795306 101259745 4351872 100191506 103852416 100257984 18102432 11441066 123167329 123148975 123409959 107903900 107898021 106392198 106391223 5715143 8061214 8061510 102588311 102617108 100844321 107831849 107823792
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