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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100844321   DNA polymerase alpha subunit B 
 tae-r.2   123148975   DNA polymerase alpha subunit B 
 tae-r.2   123160252   DNA polymerase alpha subunit B 
 tae-r.2   123167329   DNA polymerase alpha subunit B 
 hvu-r.1   123409959   DNA polymerase alpha subunit B 
 osa-u.5   4351872   uncharacterized LOC4351872 
 zma-u.5   100191506   uncharacterized LOC100191506 
 sbi-r.1   8061214   DNA polymerase alpha subunit B 
 sbi-r.1   8061510   DNA polymerase alpha subunit B 
 ath-u.5   POLA2   DNA polymerase alpha 2 
 gma-u.5   100797769   DNA polymerase alpha subunit B 
 gma-u.5   100795306   DNA polymerase alpha subunit B 
 sly-u.5   101259745   uncharacterized LOC101259745 
 bra-r.6   103852416   DNA polymerase alpha subunit B 
 vvi-u.5   100257984   uncharacterized LOC100257984 
 ppo-u.5   18102432   uncharacterized LOC18102432 
 mtr-u.5   11441066   DNA polymerase alpha subunit B 
 ghi-r.1   107898021   DNA polymerase alpha subunit B 
 ghi-r.1   107903900   DNA polymerase alpha subunit B 
 bna-r.1   106391223   DNA polymerase alpha subunit B 
 bna-r.1   106392198   DNA polymerase alpha subunit B-like 
 sot-r.1   102588311   DNA polymerase alpha subunit B 
 cit-r.1   102617108   uncharacterized LOC102617108 
 nta-r.1   107831849   uncharacterized LOC107831849 
 nta-r.1   107823792   uncharacterized LOC107823792 
 cre-r.1   CHLRE_01g017450v5   uncharacterized protein 

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Top 50 coexpressed genes to 100844321 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100844321 (bdi-r.1 coexpression data)

CoexMap"100844321"


bdiLOC100844321 | Entrez gene ID : 100844321      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 2 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03030 [list] [network] DNA replication (49 genes)
GO BP
GO:0006270 [list] [network] DNA replication initiation  (20 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (126 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (5 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003578733.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto 4,  cyto_nucl 4  (predict for XP_003578733.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003578733.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100844321
tae-r.2
for
123148975
tae-r.2
for
123160252
tae-r.2
for
123167329
hvu-r.1
for
123409959
osa-u.5
for
4351872
zma-u.5
for
100191506
sbi-r.1
for
8061214
sbi-r.1
for
8061510
ath-u.5
for
POLA2
gma-u.5
for
100797769
gma-u.5
for
100795306
sly-u.5
for
101259745
bra-r.6
for
103852416
vvi-u.5
for
100257984
ppo-u.5
for
18102432
mtr-u.5
for
11441066
ghi-r.1
for
107898021
ghi-r.1
for
107903900
bna-r.1
for
106391223
bna-r.1
for
106392198
sot-r.1
for
102588311
cit-r.1
for
102617108
nta-r.1
for
107831849
nta-r.1
for
107823792
cre-r.1
for
CHLRE_01g017450v5


Ortholog ID: 9869
Species bdi tae tae tae hvu osa zma sbi sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100844321 LOC123148975 LOC123160252 LOC123167329 LOC123409959 LOC4351872 LOC100191506 LOC8061214 LOC8061510 POLA2 LOC100797769 LOC100795306 LOC101259745 LOC103852416 LOC100257984 LOC18102432 LOC11441066 LOC107898021 LOC107903900 LOC106391223 LOC106392198 LOC102588311 LOC102617108 LOC107831849 LOC107823792 CHLRE_01g017450v5
Function* DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B uncharacterized LOC4351872 uncharacterized LOC100191506 DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha 2 DNA polymerase alpha subunit B DNA polymerase alpha subunit B uncharacterized LOC101259745 DNA polymerase alpha subunit B uncharacterized LOC100257984 uncharacterized LOC18102432 DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B DNA polymerase alpha subunit B-like DNA polymerase alpha subunit B uncharacterized LOC102617108 uncharacterized LOC107831849 uncharacterized LOC107823792 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 9
bdi03440 Homologous recombination 4
bdi03430 Mismatch repair 3
bdi03420 Nucleotide excision repair 2
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 13
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 10
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 11
sbi03420 Nucleotide excision repair 2
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 11
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 9
gma03430 Mismatch repair 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 8
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 10
ppo00230 Purine metabolism 2
ppo00240 Pyrimidine metabolism 2
ppo00480 Glutathione metabolism 2
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 11
mtr03420 Nucleotide excision repair 2
mtr03430 Mismatch repair 2
mtr03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 13
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 10
sot02010 ABC transporters 2
sot03460 Fanconi anemia pathway 2
sot03420 Nucleotide excision repair 2
sot03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 4
cit03410 Base excision repair 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 8
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100844321 123148975 123160252 123167329 123409959 4351872 100191506 8061214 8061510 843086 100797769 100795306 101259745 103852416 100257984 18102432 11441066 107898021 107903900 106391223 106392198 102588311 102617108 107831849 107823792 5715143
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