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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100796740   ADP-ribosylation factor GTPase-activating protein AGD4 
 gma-r.7   100796740   ADP-ribosylation factor GTPase-activating protein AGD4 
 gma-m.5   100796740   ADP-ribosylation factor GTPase-activating protein AGD4 
 gma-u.5   100792517   ADP-ribosylation factor GTPase-activating protein AGD3 
 gma-u.5   100796006   ADP-ribosylation factor GTPase-activating protein AGD2 
 mtr-u.5   11441813   ADP-ribosylation factor GTPase-activating protein AGD3 
 mtr-u.5   25492818   ADP-ribosylation factor GTPase-activating protein AGD2 
 mtr-u.5   11434092   ADP-ribosylation factor GTPase-activating protein AGD1 
 ppo-u.5   7496532   ADP-ribosylation factor GTPase-activating protein AGD3 
 ppo-u.5   7491430   ADP-ribosylation factor GTPase-activating protein AGD3 
 ath-u.5   SFC   ARF GTPase-activating protein 
 ath-u.5   AGD1   ARF-GAP domain 1 
 ath-u.5   AGD4   ARF-GAP domain 4 
 vvi-u.5   100261572   ADP-ribosylation factor GTPase-activating protein AGD4 
 vvi-u.5   100259206   ADP-ribosylation factor GTPase-activating protein AGD3 
 sly-u.5   101251466   ADP-ribosylation factor GTPase-activating protein AGD2-like 
 sly-u.5   104647411   ADP-ribosylation factor GTPase-activating protein AGD3 
 sly-u.5   101246911   ADP-ribosylation factor GTPase-activating protein AGD3-like 
 osa-u.5   4330061   ADP-ribosylation factor GTPase-activating protein AGD2 
 osa-u.5   4346168   ADP-ribosylation factor GTPase-activating protein AGD3 
 osa-u.5   4347541   ADP-ribosylation factor GTPase-activating protein AGD3 
 zma-u.5   103632959   ADP-ribosylation factor GTPase-activating protein AGD3 
 zma-u.5   103653236   ADP-ribosylation factor GTPase-activating protein AGD3 
 zma-u.5   100383867   uncharacterized LOC100383867 

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Top 50 coexpressed genes to 100796740 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100796740 (gma-u.5 coexpression data)

CoexMap"100796740"


gmaLOC100796740 | Entrez gene ID : 100796740      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 2 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04144 [list] [network] Endocytosis (291 genes)
GO BP
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0005096 [list] [network] GTPase activator activity  (114 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003540765.1 [sequence] [blastp]
XP_006592060.1 [sequence] [blastp]
XP_014619938.1 [sequence] [blastp]
XP_040863277.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  vacu 1,  pero 1  (predict for XP_003540765.1)
nucl 6,  cyto 4  (predict for XP_006592060.1)
nucl 7,  cyto 1,  vacu 1,  cysk 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_014619938.1)
nucl 6,  cyto 1,  chlo 1,  vacu 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_040863277.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003540765.1)
other 8  (predict for XP_006592060.1)
other 7,  mito 4  (predict for XP_014619938.1)
other 9  (predict for XP_040863277.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100796740

.
gma-r.7
for
100796740

.
gma-m.5
for
100796740

.
gma-u.5
for
100792517

.
gma-u.5
for
100796006

.
mtr-u.5
for
11441813

.
mtr-u.5
for
25492818

.
mtr-u.5
for
11434092

.
ppo-u.5
for
7496532

.
ppo-u.5
for
7491430

.
ath-u.5
for
SFC

.
ath-u.5
for
AGD1

.
ath-u.5
for
AGD4

.
vvi-u.5
for
100261572

.
vvi-u.5
for
100259206

.
sly-u.5
for
101251466

.
sly-u.5
for
104647411

.
sly-u.5
for
101246911

.
osa-u.5
for
4330061

.
osa-u.5
for
4346168

.
osa-u.5
for
4347541

.
zma-u.5
for
103632959

.
zma-u.5
for
103653236

.
zma-u.5
for
100383867

.


Ortholog ID: 1045
Species ath ath gma gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AGD2 SFC LOC100798227 LOC100796740 LOC101251466 LOC101246911 LOC4346168 LOC4330061 LOC103632959 LOC103653236 LOC103838481 LOC100259206 LOC100261572 LOC7496532 LOC7491430 LOC25492818 LOC11434092 LOC123137554 LOC123164731 LOC123401063 LOC123399832 LOC107886342 LOC107913499 LOC106454828 LOC106350152 CHLRE_03g154150v5 LOC8060928 LOC8054803 LOC102579830 LOC102605246 LOC102619435 LOC102617000 LOC100846432 LOC100843677 LOC107792712 LOC107785830
Function* ARF-GAP domain 2 ARF GTPase-activating protein ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD4 ADP-ribosylation factor GTPase-activating protein AGD2-like ADP-ribosylation factor GTPase-activating protein AGD3-like ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD4 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD1 ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD2-like ADP-ribosylation factor GTPase-activating protein AGD3-like ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD4 ADP-ribosylation factor GTPase-activating protein AGD3-like ADP-ribosylation factor GTPase-activating protein AGD4 uncharacterized protein ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD2-like ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD4-like ADP-ribosylation factor GTPase-activating protein AGD2 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD3 ADP-ribosylation factor GTPase-activating protein AGD4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
sly04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 4
osa04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00730 Thiamine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi04144 Endocytosis 3
vvi03083 Polycomb repressive complex 2
vvi03013 Nucleocytoplasmic transport 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 4
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03013 Nucleocytoplasmic transport 2
ppo03015 mRNA surveillance pathway 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
tae04075 Plant hormone signal transduction 3
tae04626 Plant-pathogen interaction 3
tae00500 Starch and sucrose metabolism 3
tae04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 7
bna00909 Sesquiterpenoid and triterpenoid biosynthesis 7
bna04142 Lysosome 4
bna04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842378 831171 100798227 100796740 101251466 101246911 4346168 4330061 103632959 103653236 103838481 100259206 100261572 7496532 7491430 25492818 11434092 123137554 123164731 123401063 123399832 107886342 107913499 106454828 106350152 5723091 8060928 8054803 102579830 102605246 102619435 102617000 100846432 100843677 107792712 107785830
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