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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100797030   nuclear pore complex protein NUP54 
 gma-r.7   100797030   nuclear pore complex protein NUP54 
 gma-m.5   100797030   nuclear pore complex protein NUP54 
 gma-u.5   100791608   nuclear pore complex protein NUP54 
 mtr-u.5   11446407   nuclear pore complex protein NUP54 
 ppo-u.5   7477029   nuclear pore complex protein NUP54 
 ppo-u.5   18101625   nuclear pore complex protein NUP54 
 ath-u.5   AT1G24310   nuclear pore complex protein 
 vvi-u.5   100242090   nuclear pore complex protein NUP54 
 sly-u.5   101253565   nuclear pore complex protein NUP54 
 osa-u.5   4342961   nuclear pore complex protein NUP54 
 zma-u.5   100276495   uncharacterized LOC100276495 

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Top 50 coexpressed genes to 100797030 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100797030 (gma-u.5 coexpression data)

CoexMap"100797030"


gmaLOC100797030 | Entrez gene ID : 100797030      
Species gma mtr ppo ath vvi sly osa zma tae hvu ghi bdi cit bra cre sbi bna nta sot
Paralog 4 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03013 [list] [network] Nucleocytoplasmic transport (189 genes)
GO BP
GO:0036228 [list] [network] protein localization to nuclear inner membrane  (4 genes)  IEA  
GO:0006999 [list] [network] nuclear pore organization  (6 genes)  IEA  
GO:0006607 [list] [network] NLS-bearing protein import into nucleus  (22 genes)  IEA  
GO CC
GO:0044613 [list] [network] nuclear pore central transport channel  (9 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (71 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (30 genes)  IEA  
Protein XP_003551474.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  chlo 1,  mito 1,  plas 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for XP_003551474.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_003551474.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100797030

.
gma-r.7
for
100797030

.
gma-m.5
for
100797030

.
gma-u.5
for
100791608

.
mtr-u.5
for
11446407

.
ppo-u.5
for
7477029

.
ppo-u.5
for
18101625

.
ath-u.5
for
AT1G24310

.
vvi-u.5
for
100242090

.
sly-u.5
for
101253565

.
osa-u.5
for
4342961

.
zma-u.5
for
100276495

.


Ortholog ID: 9798
Species ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G24310 LOC100791608 LOC100797030 LOC101253565 LOC4342961 LOC100276495 LOC103835419 LOC100242090 LOC7477029 LOC18101625 LOC11446407 LOC123044757 LOC123188639 LOC123426090 LOC107886456 LOC107909833 LOC106361889 LOC106361747 CHLRE_12g542950v5 LOC8057307 LOC102597378 LOC102626122 LOC100830854 LOC107793920 LOC107799854
Function* nuclear pore complex protein nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 uncharacterized LOC100276495 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 uncharacterized protein nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
gma03083 Polycomb repressive complex 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03010 Ribosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
cre03050 Proteasome 2
cre03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 4
nta00250 Alanine, aspartate and glutamate metabolism 3
nta03013 Nucleocytoplasmic transport 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839047 100791608 100797030 101253565 4342961 100276495 103835419 100242090 7477029 18101625 11446407 123044757 123188639 123426090 107886456 107909833 106361889 106361747 5719533 8057307 102597378 102626122 100830854 107793920 107799854
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