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Orthologous genes in OrthoFinder**

Species Gene Description
 tae-r.2   123044757   nuclear pore complex protein NUP54 
 tae-r.2   123188639   nuclear pore complex protein NUP54 
 tae-r.2   123052767   nuclear pore complex protein NUP54 
 hvu-r.1   123426090   nuclear pore complex protein NUP54 
 bdi-r.1   100830854   nuclear pore complex protein NUP54 
 osa-u.5   4342961   nuclear pore complex protein NUP54 
 zma-u.5   100276495   uncharacterized LOC100276495 
 sbi-r.1   8057307   nuclear pore complex protein NUP54 
 ath-u.5   AT1G24310   nuclear pore complex protein 
 gma-u.5   100797030   nuclear pore complex protein NUP54 
 gma-u.5   100791608   nuclear pore complex protein NUP54 
 sly-u.5   101253565   nuclear pore complex protein NUP54 
 bra-r.6   103835419   nuclear pore complex protein NUP54 
 vvi-u.5   100242090   nuclear pore complex protein NUP54 
 ppo-u.5   18101625   nuclear pore complex protein NUP54 
 ppo-u.5   7477029   nuclear pore complex protein NUP54 
 mtr-u.5   11446407   nuclear pore complex protein NUP54 
 ghi-r.1   107909833   nuclear pore complex protein NUP54 
 ghi-r.1   107886456   nuclear pore complex protein NUP54 
 bna-r.1   106361747   nuclear pore complex protein NUP54 
 bna-r.1   106361889   nuclear pore complex protein NUP54 
 sot-r.1   102597378   nuclear pore complex protein NUP54 
 cit-r.1   102626122   nuclear pore complex protein NUP54 
 nta-r.1   107799854   nuclear pore complex protein NUP54 
 nta-r.1   107793920   nuclear pore complex protein NUP54 
 cre-r.1   CHLRE_12g542950v5   uncharacterized protein 

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Top 50 coexpressed genes to 123044757 (tae-r.2 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 123044757 (tae-r.2 coexpression data)

CoexMap"123044757"


taeLOC123044757 | Entrez gene ID : 123044757    
Species tae hvu bdi osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 3 1 1 1 1 1 1 2 1 1 1 2 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG taes03013 [list] [network] Nucleocytoplasmic transport (365 genes)
GO BP
GO:0036228 [list] [network] protein localization to nuclear inner membrane  (6 genes)  IEA  
GO:0006607 [list] [network] NLS-bearing protein import into nucleus  (11 genes)  IEA  
GO:0006999 [list] [network] nuclear pore organization  (14 genes)  IEA  
GO CC
GO:0044613 [list] [network] nuclear pore central transport channel  (14 genes)  IEA  
GO:0005643 [list] [network] nuclear pore  (121 genes)  IEA  
GO MF
GO:0017056 [list] [network] structural constituent of nuclear pore  (64 genes)  IEA  
Protein XP_044323577.1 [sequence] [blastp]
XP_044323578.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  nucl_plas 4,  cyto_nucl 3,  chlo 2,  plas 1,  chlo_mito 1  (predict for XP_044323577.1)
nucl 6,  nucl_plas 4,  cyto_nucl 4,  chlo 2  (predict for XP_044323578.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_044323577.1)
chlo 9  (predict for XP_044323578.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

tae-r.2
for
123044757
tae-r.2
for
123188639
tae-r.2
for
123052767
hvu-r.1
for
123426090
bdi-r.1
for
100830854
osa-u.5
for
4342961
zma-u.5
for
100276495
sbi-r.1
for
8057307
ath-u.5
for
AT1G24310
gma-u.5
for
100797030
gma-u.5
for
100791608
sly-u.5
for
101253565
bra-r.6
for
103835419
vvi-u.5
for
100242090
ppo-u.5
for
18101625
ppo-u.5
for
7477029
mtr-u.5
for
11446407
ghi-r.1
for
107909833
ghi-r.1
for
107886456
bna-r.1
for
106361747
bna-r.1
for
106361889
sot-r.1
for
102597378
cit-r.1
for
102626122
nta-r.1
for
107799854
nta-r.1
for
107793920
cre-r.1
for
CHLRE_12g542950v5


Ortholog ID: 9798
Species tae tae tae hvu bdi osa zma sbi ath gma gma sly bra vvi ppo ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC123044757 LOC123188639 LOC123052767 LOC123426090 LOC100830854 LOC4342961 LOC100276495 LOC8057307 AT1G24310 LOC100797030 LOC100791608 LOC101253565 LOC103835419 LOC100242090 LOC18101625 LOC7477029 LOC11446407 LOC107909833 LOC107886456 LOC106361747 LOC106361889 LOC102597378 LOC102626122 LOC107799854 LOC107793920 CHLRE_12g542950v5
Function* nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 uncharacterized LOC100276495 nuclear pore complex protein NUP54 nuclear pore complex protein nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 nuclear pore complex protein NUP54 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 7
tae03018 RNA degradation 3
tae03082 ATP-dependent chromatin remodeling 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 5
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
gma03083 Polycomb repressive complex 2
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
gma00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
gma03083 Polycomb repressive complex 2
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03013 Nucleocytoplasmic transport 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 4
bra03008 Ribosome biogenesis in eukaryotes 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
vvi03010 Ribosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 3
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00290 Valine, leucine and isoleucine biosynthesis 2
ghi00660 C5-Branched dibasic acid metabolism 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
bna00590 Arachidonic acid metabolism 2
bna03013 Nucleocytoplasmic transport 2
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
nta00660 C5-Branched dibasic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01230 Biosynthesis of amino acids 4
nta00250 Alanine, aspartate and glutamate metabolism 3
nta03013 Nucleocytoplasmic transport 2
nta00290 Valine, leucine and isoleucine biosynthesis 2
nta00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03013 Nucleocytoplasmic transport 4
cre03050 Proteasome 2
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 123044757 123188639 123052767 123426090 100830854 4342961 100276495 8057307 839047 100797030 100791608 101253565 103835419 100242090 18101625 7477029 11446407 107909833 107886456 106361747 106361889 102597378 102626122 107799854 107793920 5719533
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