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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100798704   splicing regulatory glutamine/lysine-rich protein 1-like 
 gma-r.7   100798704   splicing regulatory glutamine/lysine-rich protein 1-like 
 gma-u.5   100795790   uncharacterized LOC100795790 
 mtr-u.5   11405588   serine/threonine-protein kinase fray2 
 ppo-u.5   18105827   uncharacterized LOC18105827 
 ath-u.5   AT3G48120   serine/arginine-rich splicing factor 
 vvi-u.5   100258813   uncharacterized LOC100258813 
 sly-u.5   101260908   uncharacterized LOC101260908 
 osa-u.5   4324119   uncharacterized LOC4324119 
 zma-u.5   100280368   uncharacterized LOC100280368 

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Top 50 coexpressed genes to 100798704 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100798704 (gma-u.5 coexpression data)

CoexMap"100798704"


gmaLOC100798704 | Entrez gene ID : 100798704      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000380 [list] [network] alternative mRNA splicing, via spliceosome  (4 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
Protein NP_001276306.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001276306.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001276306.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100798704

.
gma-r.7
for
100798704

.
gma-u.5
for
100795790

.
mtr-u.5
for
11405588

.
ppo-u.5
for
18105827

.
ath-u.5
for
AT3G48120

.
vvi-u.5
for
100258813

.
sly-u.5
for
101260908

.
osa-u.5
for
4324119

.
zma-u.5
for
100280368

.


Ortholog ID: 10136
Species ath gma sly osa zma vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G48120 LOC100795790 LOC101260908 LOC4324119 LOC100280368 LOC100258813 LOC18105827 LOC11405588 LOC123078943 LOC123070535 LOC123444144 LOC107909069 LOC107945936 LOC125596250 LOC106442668 LOC8063079 LOC102578259 LOC102617483 LOC100845593 LOC107818771 LOC107800883
Function* serine/arginine-rich splicing factor uncharacterized LOC100795790 uncharacterized LOC101260908 uncharacterized LOC4324119 uncharacterized LOC100280368 uncharacterized LOC100258813 uncharacterized LOC18105827 serine/threonine-protein kinase fray2 serine/arginine repetitive matrix protein 2 serine/arginine repetitive matrix protein 5 probable ATP-dependent RNA helicase DDX46 splicing regulatory glutamine/lysine-rich protein 1 arginine/serine-rich protein PNISR luc7-like protein 3 luc7-like protein 3 serine/arginine repetitive matrix protein 2 serine/arginine-rich splicing factor 4 uncharacterized LOC102617483 serine/arginine repetitive matrix protein 2 uncharacterized LOC107818771 uncharacterized LOC107800883
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 4
tae03008 Ribosome biogenesis in eukaryotes 3
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03015 mRNA surveillance pathway 3
nta03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 823967 100795790 101260908 4324119 100280368 100258813 18105827 11405588 123078943 123070535 123444144 107909069 107945936 125596250 106442668 8063079 102578259 102617483 100845593 107818771 107800883
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