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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799779   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 gma-r.7   100799779   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 gma-m.5   100799779   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 gma-u.5   100777078   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 mtr-u.5   11445486   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 ppo-u.5   18106797   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 ppo-u.5   7469564   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 ath-u.5   RPN1A   26S proteasome regulatory subunit S2 1A 
 ath-u.5   RPN1B   26S proteasome regulatory subunit S2 1B 
 vvi-u.5   100255701   26S proteasome regulatory subunit N1-like 
 sly-u.5   101252199   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 sly-u.5   101261464   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4346741   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4341960   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 osa-u.5   4328287   26S proteasome non-ATPase regulatory subunit 2 homolog A 
 zma-u.5   100384330   uncharacterized LOC100384330 
 zma-u.5   103654920   26S proteasome non-ATPase regulatory subunit 2 homolog A 

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Top 50 coexpressed genes to 100799779 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799779 (gma-u.5 coexpression data)

CoexMap"100799779"


gmaLOC100799779 | Entrez gene ID : 100799779    
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 2 2 1 2 3 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03050 [list] [network] Proteasome (106 genes)
GO BP
GO:0042176 [list] [network] regulation of protein catabolic process  (60 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (267 genes)  IEA  
GO CC
GO:0034515 [list] [network] proteasome storage granule  (5 genes)  IEA  
GO:0008540 [list] [network] proteasome regulatory particle, base subcomplex  (36 genes)  IEA  
GO:0000502 [list] [network] proteasome complex  (104 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0030234 [list] [network] enzyme regulator activity  (795 genes)  IEA  
Protein XP_003527419.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 6,  cyto_plas 4,  E.R. 3  (predict for XP_003527419.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003527419.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799779

.
gma-r.7
for
100799779

.
gma-m.5
for
100799779

.
gma-u.5
for
100777078

.
mtr-u.5
for
11445486

.
ppo-u.5
for
18106797

.
ppo-u.5
for
7469564

.
ath-u.5
for
RPN1A

.
ath-u.5
for
RPN1B

.
vvi-u.5
for
100255701

.
sly-u.5
for
101252199

.
sly-u.5
for
101261464

.
osa-u.5
for
4346741

.
osa-u.5
for
4341960

.
osa-u.5
for
4328287

.
zma-u.5
for
100384330

.
zma-u.5
for
103654920

.


Ortholog ID: 3548
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot sot cit bdi nta nta
Symbol RPN1B RPN1A LOC100799779 LOC100777078 LOC101252199 LOC101261464 LOC4328287 LOC4346741 LOC103654920 LOC100384330 LOC103828246 LOC103861833 LOC100255701 LOC18106797 LOC7469564 LOC11445486 LOC123136272 LOC123132233 LOC123411463 LOC107929387 LOC107938468 LOC106440995 LOC106361196 CHLRE_16g676197v5 LOC8069964 LOC102586490 LOC102593788 LOC102617825 LOC100837709 LOC107794282 LOC107789750
Function* 26S proteasome regulatory subunit S2 1B 26S proteasome regulatory subunit S2 1A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A uncharacterized LOC100384330 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome regulatory subunit N1-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog B uncharacterized protein 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A 26S proteasome non-ATPase regulatory subunit 2 homolog A-like 26S proteasome non-ATPase regulatory subunit 2 homolog A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 6
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 13
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
gma03050 Proteasome 6
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03420 Nucleotide excision repair 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 9
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
gma03040 Spliceosome 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 10
sly00970 Aminoacyl-tRNA biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03050 Proteasome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma04141 Protein processing in endoplasmic reticulum 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 6
zma04120 Ubiquitin mediated proteolysis 4
zma04141 Protein processing in endoplasmic reticulum 3
zma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 7
bra04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 6
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 5
ppo00513 Various types of N-glycan biosynthesis 5
ppo04141 Protein processing in endoplasmic reticulum 5
ppo00020 Citrate cycle (TCA cycle) 4
ppo01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae04141 Protein processing in endoplasmic reticulum 6
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 8
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 2
hvu00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03022 Basal transcription factors 2
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 11
ghi04141 Protein processing in endoplasmic reticulum 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00010 Glycolysis / Gluconeogenesis 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 7
bna00010 Glycolysis / Gluconeogenesis 3
bna01200 Carbon metabolism 3
bna01230 Biosynthesis of amino acids 3
bna03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00020 Citrate cycle (TCA cycle) 2
sbi01200 Carbon metabolism 2
sbi00190 Oxidative phosphorylation 2
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 6
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 5
cit03050 Proteasome 4
cit04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 5
bdi04141 Protein processing in endoplasmic reticulum 3
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 7
nta04075 Plant hormone signal transduction 2
nta04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828964 816580 100799779 100777078 101252199 101261464 4328287 4346741 103654920 100384330 103828246 103861833 100255701 18106797 7469564 11445486 123136272 123132233 123411463 107929387 107938468 106440995 106361196 5721356 8069964 102586490 102593788 102617825 100837709 107794282 107789750
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