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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100799922   protein TIME FOR COFFEE 
 gma-r.7   100799922   protein TIME FOR COFFEE 
 gma-m.5   100799922   protein TIME FOR COFFEE 
 gma-u.5   100783097   protein TIME FOR COFFEE 
 gma-u.5   100784698   protein TIME FOR COFFEE 
 gma-u.5   100808741   protein TIME FOR COFFEE 
 mtr-u.5   11415129   protein TIME FOR COFFEE 
 mtr-u.5   11429563   protein TIME FOR COFFEE 
 ppo-u.5   7480039   protein TIME FOR COFFEE 
 ppo-u.5   18099647   protein TIME FOR COFFEE 
 ppo-u.5   18096674   protein TIME FOR COFFEE 
 ath-u.5   TIC   time for coffee 
 vvi-u.5   100256257   protein TIME FOR COFFEE 
 vvi-u.5   100252941   protein TIME FOR COFFEE 
 sly-u.5   101257597   protein TIME FOR COFFEE 
 osa-u.5   4343665   protein TIME FOR COFFEE 
 zma-u.5   100381721   uncharacterized LOC100381721 
 zma-u.5   100502414   uncharacterized LOC100502414 

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Top 50 coexpressed genes to 100799922 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100799922 (gma-u.5 coexpression data)

CoexMap"100799922"


gmaLOC100799922 | Entrez gene ID : 100799922      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 6 2 3 1 2 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0042752 [list] [network] regulation of circadian rhythm  (40 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
Protein XP_006606048.1 [sequence] [blastp]
XP_006606049.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto_nucl 5  (predict for XP_006606048.1)
nucl 9,  cyto_nucl 5  (predict for XP_006606049.1)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_006606048.1)
mito 7,  chlo 3  (predict for XP_006606049.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100799922
gma-r.7
for
100799922
gma-m.5
for
100799922
gma-u.5
for
100783097
gma-u.5
for
100784698
gma-u.5
for
100808741
mtr-u.5
for
11415129
mtr-u.5
for
11429563
ppo-u.5
for
7480039
ppo-u.5
for
18099647
ppo-u.5
for
18096674
ath-u.5
for
TIC
vvi-u.5
for
100256257
vvi-u.5
for
100252941
sly-u.5
for
101257597
osa-u.5
for
4343665
zma-u.5
for
100381721
zma-u.5
for
100502414


Ortholog ID: 3582
Species gma gma mtr mtr ppo ppo ath bra bra vvi vvi ghi ghi bna bna cit cit sly sot nta nta osa zma zma tae hvu hvu sbi bdi
Symbol LOC100808741 LOC100784698 LOC11415129 LOC11429563 LOC18096674 LOC7457865 TIC LOC117125710 LOC103834588 LOC100256257 LOC100252941 LOC107901704 LOC107930476 LOC106388249 LOC106433620 LOC102620959 LOC102612366 LOC101257597 LOC102592172 LOC107818208 LOC107826656 LOC4343665 LOC100381721 LOC100502414 LOC123052349 LOC123397440 LOC123425631 LOC8083901 LOC100825357
Function* protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE time for coffee protein TIME FOR COFFEE-like protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE protein TIME FOR COFFEE uncharacterized LOC100381721 uncharacterized LOC100502414 protein TIME FOR COFFEE uncharacterized LOC123397440 protein TIME FOR COFFEE-like protein TIME FOR COFFEE protein TIME FOR COFFEE
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100808741 100784698 11415129 11429563 18096674 7457865 821807 117125710 103834588 100256257 100252941 107901704 107930476 106388249 106433620 102620959 102612366 101257597 102592172 107818208 107826656 4343665 100381721 100502414 123052349 123397440 123425631 8083901 100825357
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