ATTED-II : GeneCoexpression result

Species	Gene	Description
gma-u.5	100801248	protein TIC 56, chloroplastic
gma-r.7	100801248	protein TIC 56, chloroplastic
gma-m.5	100801248	protein TIC 56, chloroplastic
gma-u.5	100781480	protein TIC 56, chloroplastic
mtr-u.5	11414533	protein TIC 56, chloroplastic
ppo-u.5	7488715	protein TIC 56, chloroplastic
ath-u.5	AT5G01590	histone-lysine N-methyltransferase ATXR3-like protein
vvi-u.5	100257554	protein TIC 56, chloroplastic
sly-u.5	101255724	protein TIC 56, chloroplastic

functional annotation

KEGG

GO BP

GO:0045037 [list] [network] protein import into chloroplast stroma

(16 genes)

IEA

GO CC

GO:0009706 [list] [network] chloroplast inner membrane

(37 genes)

IEA

GO MF

Protein

XP_003516979.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for XP_003516979.1)

Subcellular
localization
TargetP

chlo 9

(predict for XP_003516979.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target			Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	gma-u.5 for 100801248	gma-r.7 for 100801248	gma-m.5 for 100801248	gma-u.5 for 100781480	mtr-u.5 for 11414533	ppo-u.5 for 7488715	ath-u.5 for AT5G01590	vvi-u.5 for 100257554	sly-u.5 for 101255724

Ortholog ID: 12455

Species

gma

mtr

ppo

ath

bra

vvi

ghi

bna

cit

sly

sot

nta

cre

Symbol

Function^*

protein TIC 56, chloroplastic

histone-lysine N-methyltransferase ATXR3-like protein

protein TIC 56, chloroplastic

protein TIC 56, chloroplastic-like

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	3
vvi04141	Protein processing in endoplasmic reticulum	2
vvi03010	Ribosome	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	2
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03010	Ribosome	6
sly00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	3
nta00230	Purine metabolism	2
nta00670	One carbon pool by folate	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	5
nta00450	Selenocompound metabolism	2
nta00740	Riboflavin metabolism	2
nta00790	Folate biosynthesis	2
nta01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

100781480

100801248

11414533

7488715

830369

103855409

100257554

107943205

107958080

106433815

106427227

102626315

101255724

102601433

107822773

107824360

5722802

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 100801248 (gma-u.5 coexpression data)

Top 50 enrichment test to 100801248 (gma-u.5 coexpression data)


Species	gma	mtr	ppo	ath	vvi	sly	bdi	hvu	bra	cit	bna	sbi	ghi	osa	sot	nta	cre	tae	zma
Paralog	4	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 100801248 (gma-u.5 coexpression data)

Top 50 enrichment test to 100801248 (gma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**