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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   101255724   protein TIC 56, chloroplastic 
 sly-r.6   101255724   protein TIC 56, chloroplastic 
 sot-r.1   102601433   protein TIC 56, chloroplastic 
 nta-r.1   107822773   protein TIC 56, chloroplastic 
 nta-r.1   107824360   protein TIC 56, chloroplastic-like 
 ath-u.5   AT5G01590   histone-lysine N-methyltransferase ATXR3-like protein 
 gma-u.5   100801248   protein TIC 56, chloroplastic 
 gma-u.5   100781480   protein TIC 56, chloroplastic 
 bra-r.6   103855409   protein TIC 56, chloroplastic 
 vvi-u.5   100257554   protein TIC 56, chloroplastic 
 ppo-u.5   7488715   protein TIC 56, chloroplastic 
 mtr-u.5   11414533   protein TIC 56, chloroplastic 
 ghi-r.1   107943205   protein TIC 56, chloroplastic 
 ghi-r.1   107938965   protein TIC 56, chloroplastic 
 ghi-r.1   107899588   protein TIC 56, chloroplastic 
 bna-r.1   106427227   protein TIC 56, chloroplastic 
 bna-r.1   106433815   protein TIC 56, chloroplastic 
 cit-r.1   102626315   protein TIC 56, chloroplastic 
 cre-r.1   CHLRE_17g727100v5   uncharacterized protein 

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Top 50 coexpressed genes to 101255724 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 101255724 (sly-u.5 coexpression data)

CoexMap"101255724"


slyLOC101255724 | Entrez gene ID : 101255724      
Species sly sot nta ath gma bra vvi ppo mtr ghi bna cit cre bdi osa tae zma sbi hvu
Paralog 2 1 2 1 2 1 1 1 1 3 2 1 1 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045037 [list] [network] protein import into chloroplast stroma  (5 genes)  IEA  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (21 genes)  IEA  
GO MF
Protein XP_004246347.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  pero 4  (predict for XP_004246347.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_004246347.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
101255724
sly-r.6
for
101255724
sot-r.1
for
102601433
nta-r.1
for
107822773
nta-r.1
for
107824360
ath-u.5
for
AT5G01590
gma-u.5
for
100801248
gma-u.5
for
100781480
bra-r.6
for
103855409
vvi-u.5
for
100257554
ppo-u.5
for
7488715
mtr-u.5
for
11414533
ghi-r.1
for
107943205
ghi-r.1
for
107938965
ghi-r.1
for
107899588
bna-r.1
for
106427227
bna-r.1
for
106433815
cit-r.1
for
102626315
cre-r.1
for
CHLRE_17g727100v5


Ortholog ID: 12455
Species sly sot nta nta ath gma gma bra vvi ppo mtr ghi ghi ghi bna bna cit cre
Symbol LOC101255724 LOC102601433 LOC107822773 LOC107824360 AT5G01590 LOC100801248 LOC100781480 LOC103855409 LOC100257554 LOC7488715 LOC11414533 LOC107943205 LOC107938965 LOC107958080 LOC106427227 LOC106433815 LOC102626315 CHLRE_17g727100v5
Function* protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic-like histone-lysine N-methyltransferase ATXR3-like protein protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic protein TIC 56, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 6
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 3
nta00230 Purine metabolism 2
nta00670 One carbon pool by folate 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta00450 Selenocompound metabolism 2
nta00740 Riboflavin metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 3
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03010 Ribosome 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 101255724 102601433 107822773 107824360 830369 100801248 100781480 103855409 100257554 7488715 11414533 107943205 107938965 107958080 106427227 106433815 102626315 5722802
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