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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100801400   lysine--tRNA ligase 
 gma-r.7   100801400   lysine--tRNA ligase 
 gma-u.5   100789543   pentatricopeptide repeat-containing protein At2g01510, mitochondrial 
 mtr-u.5   25501870   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 ghi-r.1   107962736   pentatricopeptide repeat-containing protein At2g22070 
 cit-r.1   102615482   putative pentatricopeptide repeat-containing protein At1g68930 

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Top 50 coexpressed genes to 100801400 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100801400 (gma-u.5 coexpression data)

CoexMap"100801400"


gmaLOC100801400 | Entrez gene ID : 100801400      
Species gma mtr ghi cit osa nta bdi vvi sot bra ppo tae sly ath zma hvu sbi cre bna
Paralog 3 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006430 [list] [network] lysyl-tRNA aminoacylation  (5 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (1702 genes)  IEA  
GO MF
GO:0004824 [list] [network] lysine-tRNA ligase activity  (5 genes)  IEA  
GO:0000049 [list] [network] tRNA binding  (46 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1182 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_006584019.1 [sequence] [blastp]
XP_014633706.1 [sequence] [blastp]
XP_025985130.1 [sequence] [blastp]
XP_025985133.1 [sequence] [blastp]
XP_025985134.1 [sequence] [blastp]
XP_040873360.1 [sequence] [blastp]
XP_040873361.1 [sequence] [blastp]
XP_040873362.1 [sequence] [blastp]
XP_040873363.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_006584019.1)
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_014633706.1)
nucl 4,  cyto 2,  chlo 1,  plas 1,  mito 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_025985130.1)
nucl 4,  cyto 2,  chlo 1,  plas 1,  mito 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_025985133.1)
nucl 4,  cyto 2,  chlo 1,  plas 1,  mito 1,  vacu 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1  (predict for XP_025985134.1)
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_040873360.1)
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_040873361.1)
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_040873362.1)
cyto 5,  nucl 1,  vacu 1,  cysk_nucl 1,  E.R._vacu 1,  chlo 1,  mito 1,  cysk 1,  chlo_mito 1,  nucl_plas 1  (predict for XP_040873363.1)
Subcellular
localization
TargetP
scret 6,  other 4  (predict for XP_006584019.1)
scret 6,  other 4  (predict for XP_014633706.1)
mito 6,  other 3  (predict for XP_025985130.1)
mito 6,  other 3  (predict for XP_025985133.1)
mito 6,  other 3  (predict for XP_025985134.1)
scret 6,  other 4  (predict for XP_040873360.1)
scret 6,  other 4  (predict for XP_040873361.1)
scret 6,  other 4  (predict for XP_040873362.1)
scret 6,  other 4  (predict for XP_040873363.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100801400
gma-r.7
for
100801400
gma-u.5
for
100789543
mtr-u.5
for
25501870
ghi-r.1
for
107962736
cit-r.1
for
102615482


Ortholog ID: 16432
Species gma gma mtr ghi cit
Symbol LOC100801400 LOC100789543 LOC25501870 LOC107962736 LOC102615482
Function* lysine--tRNA ligase pentatricopeptide repeat-containing protein At2g01510, mitochondrial pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At2g22070 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100801400 100789543 25501870 107962736 102615482
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