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Orthologous genes in OrthoFinder**

Species Gene Description
 mtr-u.5   25501870   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 mtr-r.5   25501870   pentatricopeptide repeat-containing protein At5g04780, mitochondrial 
 gma-u.5   100789543   pentatricopeptide repeat-containing protein At2g01510, mitochondrial 
 gma-u.5   100801400   lysine--tRNA ligase 

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Top 50 coexpressed genes to 25501870 (mtr-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 25501870 (mtr-u.5 coexpression data)

CoexMap"25501870"


mtrLOC25501870 | Entrez gene ID : 25501870      
Species mtr gma ppo hvu vvi tae nta bra cit ghi zma bdi sly sbi ath cre osa sot bna
Paralog 2 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (432 genes)  IEA  
GO CC
GO MF
GO:0008270 [list] [network] zinc ion binding  (919 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1400 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5045 genes)  IEA  
Protein XP_013446762.1 [sequence] [blastp]
XP_024627948.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_013446762.1)
nucl 5,  cyto 4,  chlo 1,  mito 1,  chlo_mito 1  (predict for XP_024627948.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for XP_013446762.1)
other 5,  mito 4  (predict for XP_024627948.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

mtr-u.5
for
25501870

.
mtr-r.5
for
25501870

.
gma-u.5
for
100789543

.
gma-u.5
for
100801400

.


Ortholog ID: 16432
Species gma gma mtr ghi cit
Symbol LOC100789543 LOC100801400 LOC25501870 LOC107962736 LOC102615482
Function* pentatricopeptide repeat-containing protein At2g01510, mitochondrial lysine--tRNA ligase pentatricopeptide repeat-containing protein At5g04780, mitochondrial pentatricopeptide repeat-containing protein At2g22070 putative pentatricopeptide repeat-containing protein At1g68930
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100789543 100801400 25501870 107962736 102615482
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