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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   BHLH320   bHLH transcription factor bHLH320 
 gma-r.7   BHLH320   bHLH transcription factor bHLH320 
 gma-u.5   BHLH322   bHLH transcription factor bHLH322 
 gma-u.5   BHLH300   bHLH transcription factor bHLH300 
 mtr-u.5   25483186   transcription factor ORG2 
 mtr-u.5   11433801   transcription factor ORG2 
 mtr-u.5   25483183   transcription factor ORG2 
 ath-u.5   BHLH100   basic helix-loop-helix protein 100 
 ath-u.5   bHLH38   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 ath-u.5   bHLH39   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 sly-u.5   104644426   uncharacterized LOC104644426 
 sly-u.5   101258211   putative transcription factor SlbHLH068 
 osa-u.5   4325750   protein IRON-RELATED TRANSCRIPTION FACTOR 2 
 zma-u.5   103650720   protein IRON-RELATED TRANSCRIPTION FACTOR 2 
 zma-u.5   103636279   protein IRON-RELATED TRANSCRIPTION FACTOR 2 

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Top 50 coexpressed genes to BHLH320 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BHLH320 (gma-u.5 coexpression data)

CoexMap"100803424"


gmaBHLH320 | Entrez gene ID : 100803424      
Species gma mtr ath sly osa zma sbi nta bra cre vvi cit hvu ppo bdi sot tae bna ghi
Paralog 4 3 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (844 genes)  IEA  
GO CC
GO:0090575 [list] [network] RNA polymerase II transcription regulator complex  (171 genes)  IEA  
GO MF
GO:0000977 [list] [network] RNA polymerase II transcription regulatory region sequence-specific DNA binding  (500 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (557 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (899 genes)  IEA  
Protein XP_003520500.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cyto 1,  cysk_nucl 1  (predict for XP_003520500.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003520500.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
BHLH320

.
gma-r.7
for
BHLH320

.
gma-u.5
for
BHLH322

.
gma-u.5
for
BHLH300

.
mtr-u.5
for
25483186

.
mtr-u.5
for
11433801

.
mtr-u.5
for
25483183

.
ath-u.5
for
BHLH100

.
ath-u.5
for
bHLH38

.
ath-u.5
for
bHLH39

.
sly-u.5
for
104644426

.
sly-u.5
for
101258211

.
osa-u.5
for
4325750

.
zma-u.5
for
103650720

.
zma-u.5
for
103636279

.


Ortholog ID: 917
Species ath ath gma gma sly sly osa zma zma mtr mtr tae hvu ghi ghi sbi sot bdi bdi nta nta
Symbol bHLH38 bHLH39 BHLH322 BHLH320 LOC104644426 LOC101258211 LOC4325750 LOC103636279 LOC103650720 LOC11433801 LOC25483183 LOC123072532 LOC123445544 LOC107903258 LOC107961387 LOC110434161 LOC102584847 LOC100840404 LOC100838371 LOC107796757 LOC107796758
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein basic helix-loop-helix (bHLH) DNA-binding superfamily protein bHLH transcription factor bHLH322 bHLH transcription factor bHLH320 uncharacterized LOC104644426 putative transcription factor SlbHLH068 protein IRON-RELATED TRANSCRIPTION FACTOR 2 protein IRON-RELATED TRANSCRIPTION FACTOR 2 protein IRON-RELATED TRANSCRIPTION FACTOR 2 transcription factor ORG2 transcription factor ORG2 protein IRON-RELATED TRANSCRIPTION FACTOR 2 protein IRON-RELATED TRANSCRIPTION FACTOR 2-like transcription factor ORG2 transcription factor ORG2 transcription factor bHLH101-like transcription factor ORG2-like protein IRON-RELATED TRANSCRIPTION FACTOR 2 protein IRON-RELATED TRANSCRIPTION FACTOR 2 transcription factor ORG2 transcription factor ORG2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04712 Circadian rhythm - plant 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly04120 Ubiquitin mediated proteolysis 2
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04142 Lysosome 2
mtr00740 Riboflavin metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 3
hvu00999 Biosynthesis of various plant secondary metabolites 3
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00270 Cysteine and methionine metabolism 2
bdi00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824864 824865 102667275 100803424 104644426 101258211 4325750 103636279 103650720 11433801 25483183 123072532 123445544 107903258 107961387 110434161 102584847 100840404 100838371 107796757 107796758
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