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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804064   asparagine--tRNA ligase, cytoplasmic 1 
 gma-r.7   100804064   asparagine--tRNA ligase, cytoplasmic 1 
 gma-u.5   100801732   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100796860   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 gma-u.5   100790605   asparagine--tRNA ligase, cytoplasmic 1 
 mtr-u.5   11434753   asparagine--tRNA ligase, cytoplasmic 1 
 mtr-u.5   11409968   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 mtr-u.5   11412373   asparagine--tRNA ligase, cytoplasmic 1 
 ppo-u.5   18106906   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7469583   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 ppo-u.5   7484683   asparagine--tRNA ligase, cytoplasmic 1 
 ath-u.5   NS1   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 ath-u.5   SYNC1   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 ath-u.5   SYNC3   Class II aminoacyl-tRNA and biotin synthetases superfamily protein 
 vvi-u.5   100249892   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 vvi-u.5   100257593   asparagine--tRNA ligase, cytoplasmic 1 
 sly-u.5   101254276   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 sly-u.5   ats1   putative asparaginyl-tRNA synthetase 
 osa-u.5   4325717   asparagine--tRNA ligase, cytoplasmic 3 
 osa-u.5   4343250   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100281485   uncharacterized LOC100281485 
 zma-u.5   103633183   asparagine--tRNA ligase, chloroplastic/mitochondrial 
 zma-u.5   100217176   uncharacterized LOC100217176 

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Top 50 coexpressed genes to 100804064 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804064 (gma-u.5 coexpression data)

CoexMap"100804064"


gmaLOC100804064 | Entrez gene ID : 100804064      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 5 3 3 3 2 2 2 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00970 [list] [network] Aminoacyl-tRNA biosynthesis (137 genes)
GO BP
GO:0006421 [list] [network] asparaginyl-tRNA aminoacylation  (6 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1058 genes)  IEA  
GO MF
GO:0004816 [list] [network] asparagine-tRNA ligase activity  (6 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (3753 genes)  IEA  
GO:0003676 [list] [network] nucleic acid binding  (6221 genes)  IEA  
Protein XP_003530489.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 4,  nucl 2,  cyto_plas 2  (predict for XP_003530489.1)
Subcellular
localization
TargetP
other 5,  chlo 4  (predict for XP_003530489.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804064

.
gma-r.7
for
100804064

.
gma-u.5
for
100801732

.
gma-u.5
for
100796860

.
gma-u.5
for
100790605

.
mtr-u.5
for
11434753

.
mtr-u.5
for
11409968

.
mtr-u.5
for
11412373

.
ppo-u.5
for
18106906

.
ppo-u.5
for
7469583

.
ppo-u.5
for
7484683

.
ath-u.5
for
NS1

.
ath-u.5
for
SYNC1

.
ath-u.5
for
SYNC3

.
vvi-u.5
for
100249892

.
vvi-u.5
for
100257593

.
sly-u.5
for
101254276

.
sly-u.5
for
ats1

.
osa-u.5
for
4325717

.
osa-u.5
for
4343250

.
zma-u.5
for
100281485

.
zma-u.5
for
103633183

.
zma-u.5
for
100217176

.


Ortholog ID: 2286
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol NS1 SYNC3 LOC100790605 LOC100796860 ats1 LOC101254276 LOC4325717 LOC4343250 LOC103633183 LOC100217176 LOC103868237 LOC103834005 LOC100249892 LOC100257593 LOC7484683 LOC18107659 LOC11434753 LOC11409968 LOC123188520 LOC123052636 LOC123425107 LOC123425975 LOC107962687 LOC107895466 LOC106436903 LOC106432830 CHLRE_03g193800v5 LOC8080686 LOC8081503 LOC102603407 LOC102578894 LOC102611476 LOC102607244 LOC100830162 LOC100827886 LOC107776004 LOC107809566
Function* Class II aminoacyl-tRNA and biotin synthetases superfamily protein Class II aminoacyl-tRNA and biotin synthetases superfamily protein asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial putative asparaginyl-tRNA synthetase asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 3 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial uncharacterized LOC100217176 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1-like asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 uncharacterized protein asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, cytoplasmic 1-like asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, cytoplasmic 1 asparagine--tRNA ligase, chloroplastic/mitochondrial asparagine--tRNA ligase, chloroplastic/mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03040 Spliceosome 2
ath04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 4
sly03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 6
sly00860 Porphyrin metabolism 5
sly00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 8
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 7
zma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma00561 Glycerolipid metabolism 2
zma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03010 Ribosome 3
bra03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
vvi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
vvi00970 Aminoacyl-tRNA biosynthesis 4
vvi04141 Protein processing in endoplasmic reticulum 3
vvi03015 mRNA surveillance pathway 2
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
mtr03040 Spliceosome 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03010 Ribosome 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 9
ghi03008 Ribosome biogenesis in eukaryotes 3
ghi00860 Porphyrin metabolism 3
ghi01240 Biosynthesis of cofactors 3
ghi00450 Selenocompound metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00480 Glutathione metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 4
bna00561 Glycerolipid metabolism 2
bna00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 9
cre01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 3
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 8
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
cit04141 Protein processing in endoplasmic reticulum 2
cit03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
bdi03013 Nucleocytoplasmic transport 3
bdi03010 Ribosome 3
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 7
nta03010 Ribosome 4
nta03060 Protein export 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 4
nta03010 Ribosome 4
nta00750 Vitamin B6 metabolism 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 827443 843436 100790605 100796860 543755 101254276 4325717 4343250 103633183 100217176 103868237 103834005 100249892 100257593 7484683 18107659 11434753 11409968 123188520 123052636 123425107 123425975 107962687 107895466 106436903 106432830 5718708 8080686 8081503 102603407 102578894 102611476 102607244 100830162 100827886 107776004 107809566
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