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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804116   aminodeoxychorismate synthase, chloroplastic 
 gma-r.7   100804116   aminodeoxychorismate synthase, chloroplastic 
 gma-m.5   100804116   aminodeoxychorismate synthase, chloroplastic 
 gma-u.5   100817174   aminodeoxychorismate synthase, chloroplastic 
 mtr-u.5   11408516   aminodeoxychorismate synthase, chloroplastic 
 ppo-u.5   7458655   aminodeoxychorismate synthase, chloroplastic 
 ath-u.5   emb1997   para-aminobenzoate (PABA) synthase family protein 
 vvi-u.5   100258193   aminodeoxychorismate synthase, chloroplastic 
 sly-u.5   543912   aminodeoxychorismate synthase/glutamine amidotransferase 
 osa-u.5   4341959   probable aminodeoxychorismate synthase, chloroplastic 
 zma-u.5   103629593   probable aminodeoxychorismate synthase, chloroplastic 

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Top 50 coexpressed genes to 100804116 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804116 (gma-u.5 coexpression data)

CoexMap"100804116"


gmaLOC100804116 | Entrez gene ID : 100804116      
Species gma mtr ppo ath vvi sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00790 [list] [network] Folate biosynthesis (57 genes)
gmx01240 [list] [network] Biosynthesis of cofactors (475 genes)
GO BP
GO:0008153 [list] [network] 4-aminobenzoate biosynthetic process  (2 genes)  IEA  
GO:0009396 [list] [network] folic acid-containing compound biosynthetic process  (20 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0046820 [list] [network] 4-amino-4-deoxychorismate synthase activity  (2 genes)  IEA  
Protein XP_003535532.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 1,  mito 1,  cysk 1,  cysk_nucl 1  (predict for XP_003535532.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003535532.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804116

.
gma-r.7
for
100804116

.
gma-m.5
for
100804116

.
gma-u.5
for
100817174

.
mtr-u.5
for
11408516

.
ppo-u.5
for
7458655

.
ath-u.5
for
emb1997

.
vvi-u.5
for
100258193

.
sly-u.5
for
543912

.
osa-u.5
for
4341959

.
zma-u.5
for
103629593

.


Ortholog ID: 7934
Species ath gma gma sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol emb1997 LOC100804116 LOC100817174 LOC543912 LOC4341959 LOC103629593 LOC103829774 LOC103864950 LOC100258193 LOC7458655 LOC11408516 LOC123148670 LOC100049050 LOC123407654 LOC121222542 LOC121207735 LOC106448734 LOC106394832 CHLRE_03g181400v5 LOC8063826 LOC102586660 LOC102628758 LOC100842215 LOC107830694 LOC107801527
Function* para-aminobenzoate (PABA) synthase family protein aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase/glutamine amidotransferase probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic-like aminodeoxychorismate synthase, chloroplastic-like uncharacterized protein probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00790 Folate biosynthesis 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae03082 ATP-dependent chromatin remodeling 3
tae00790 Folate biosynthesis 3
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
tae01230 Biosynthesis of amino acids 7
tae01240 Biosynthesis of cofactors 6
tae00790 Folate biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00760 Nicotinate and nicotinamide metabolism 3
ghi00790 Folate biosynthesis 2
ghi00910 Nitrogen metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi00790 Folate biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre01240 Biosynthesis of cofactors 4
cre00260 Glycine, serine and threonine metabolism 3
cre01200 Carbon metabolism 3
cre00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00920 Sulfur metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817437 100804116 100817174 543912 4341959 103629593 103829774 103864950 100258193 7458655 11408516 123148670 100049050 123407654 121222542 121207735 106448734 106394832 5728450 8063826 102586660 102628758 100842215 107830694 107801527
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