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Orthologous genes in OrthoFinder**

Species Gene Description
 cre-r.1   CHLRE_03g181400v5   uncharacterized protein 
 ath-u.5   emb1997   para-aminobenzoate (PABA) synthase family protein 
 gma-u.5   100817174   aminodeoxychorismate synthase, chloroplastic 
 gma-u.5   100804116   aminodeoxychorismate synthase, chloroplastic 
 sly-u.5   543912   aminodeoxychorismate synthase/glutamine amidotransferase 
 osa-u.5   4341959   probable aminodeoxychorismate synthase, chloroplastic 
 zma-u.5   103629593   probable aminodeoxychorismate synthase, chloroplastic 
 bra-r.6   103829774   aminodeoxychorismate synthase, chloroplastic 
 bra-r.6   103864950   aminodeoxychorismate synthase, chloroplastic 
 vvi-u.5   100258193   aminodeoxychorismate synthase, chloroplastic 
 ppo-u.5   7458655   aminodeoxychorismate synthase, chloroplastic 
 mtr-u.5   11408516   aminodeoxychorismate synthase, chloroplastic 
 tae-r.2   123148670   probable aminodeoxychorismate synthase, chloroplastic 
 tae-r.2   123164873   probable aminodeoxychorismate synthase, chloroplastic 
 tae-r.2   100049050   probable aminodeoxychorismate synthase, chloroplastic 
 hvu-r.1   123407654   probable aminodeoxychorismate synthase, chloroplastic 
 ghi-r.1   121222542   aminodeoxychorismate synthase, chloroplastic 
 ghi-r.1   121207735   aminodeoxychorismate synthase, chloroplastic 
 bna-r.1   106352622   aminodeoxychorismate synthase, chloroplastic 
 bna-r.1   106394832   aminodeoxychorismate synthase, chloroplastic-like 
 bna-r.1   106433238   aminodeoxychorismate synthase, chloroplastic 
 sbi-r.1   8063826   probable aminodeoxychorismate synthase, chloroplastic 
 sot-r.1   102586660   aminodeoxychorismate synthase, chloroplastic 
 cit-r.1   102628758   aminodeoxychorismate synthase, chloroplastic 
 bdi-r.1   100842215   probable aminodeoxychorismate synthase, chloroplastic 
 nta-r.1   107801527   aminodeoxychorismate synthase, chloroplastic 
 nta-r.1   107830694   aminodeoxychorismate synthase, chloroplastic 

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Top 50 coexpressed genes to CHLRE_03g181400v5 (cre-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CHLRE_03g181400v5 (cre-r.1 coexpression data)

CoexMap"5728450"


creCHLRE_03g181400v5 | Entrez gene ID : 5728450    
Species cre ath gma sly osa zma bra vvi ppo mtr tae hvu ghi bna sbi sot cit bdi nta
Paralog 1 1 2 1 1 1 2 1 1 1 3 1 2 3 1 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG cre00790 [list] [network] Folate biosynthesis (19 genes)
cre01240 [list] [network] Biosynthesis of cofactors (149 genes)
GO BP
GO:0000162 [list] [network] L-tryptophan biosynthetic process  (10 genes)  IEA  
GO CC
GO MF
Protein XP_042926177.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 4,  cysk 1,  cysk_plas 1,  cyto 1,  mito 1  (predict for XP_042926177.1)
Subcellular
localization
TargetP
other 6,  scret 4  (predict for XP_042926177.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cre-r.1
for
CHLRE_03g181400v5
ath-u.5
for
emb1997
gma-u.5
for
100817174
gma-u.5
for
100804116
sly-u.5
for
543912
osa-u.5
for
4341959
zma-u.5
for
103629593
bra-r.6
for
103829774
bra-r.6
for
103864950
vvi-u.5
for
100258193
ppo-u.5
for
7458655
mtr-u.5
for
11408516
tae-r.2
for
123148670
tae-r.2
for
123164873
tae-r.2
for
100049050
hvu-r.1
for
123407654
ghi-r.1
for
121222542
ghi-r.1
for
121207735
bna-r.1
for
106352622
bna-r.1
for
106394832
bna-r.1
for
106433238
sbi-r.1
for
8063826
sot-r.1
for
102586660
cit-r.1
for
102628758
bdi-r.1
for
100842215
nta-r.1
for
107801527
nta-r.1
for
107830694


Ortholog ID: 7934
Species cre ath gma gma sly osa zma bra bra vvi ppo mtr tae tae tae hvu ghi ghi bna bna bna sbi sot cit bdi nta nta
Symbol CHLRE_03g181400v5 emb1997 LOC100817174 LOC100804116 LOC543912 LOC4341959 LOC103629593 LOC103829774 LOC103864950 LOC100258193 LOC7458655 LOC11408516 LOC123148670 LOC123164873 LOC100049050 LOC123407654 LOC121222542 LOC121207735 LOC106394832 LOC106433238 LOC106448734 LOC8063826 LOC102586660 LOC102628758 LOC100842215 LOC107801527 LOC107830694
Function* uncharacterized protein para-aminobenzoate (PABA) synthase family protein aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase/glutamine amidotransferase probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic-like aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic-like probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic probable aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic aminodeoxychorismate synthase, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 4
cre01240 Biosynthesis of cofactors 4
cre00260 Glycine, serine and threonine metabolism 3
cre01200 Carbon metabolism 3
cre00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00790 Folate biosynthesis 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 5
osa00790 Folate biosynthesis 2
osa00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04382 Cornified envelope formation 2
bra00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
bra01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01240 Biosynthesis of cofactors 4
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00790 Folate biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
mtr02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 5
tae03082 ATP-dependent chromatin remodeling 3
tae00790 Folate biosynthesis 3
tae03083 Polycomb repressive complex 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
tae01230 Biosynthesis of amino acids 7
tae01240 Biosynthesis of cofactors 6
tae00790 Folate biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
tae01230 Biosynthesis of amino acids 7
tae01240 Biosynthesis of cofactors 6
tae00790 Folate biosynthesis 3
tae00999 Biosynthesis of various plant secondary metabolites 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 3
ghi00760 Nicotinate and nicotinamide metabolism 3
ghi00790 Folate biosynthesis 2
ghi00910 Nitrogen metabolism 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 4
ghi00760 Nicotinate and nicotinamide metabolism 4
ghi00790 Folate biosynthesis 2
ghi00250 Alanine, aspartate and glutamate metabolism 2
ghi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00592 alpha-Linolenic acid metabolism 4
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
bna00270 Cysteine and methionine metabolism 2
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00790 Folate biosynthesis 4
bna01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 3
cit04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00920 Sulfur metabolism 2
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00790 Folate biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 5728450 817437 100817174 100804116 543912 4341959 103629593 103829774 103864950 100258193 7458655 11408516 123148670 123164873 100049050 123407654 121222542 121207735 106394832 106433238 106448734 8063826 102586660 102628758 100842215 107801527 107830694
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