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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100804501   E3 ubiquitin-protein ligase UPL3 
 gma-r.7   100804501   E3 ubiquitin-protein ligase UPL3 
 gma-m.5   100804501   E3 ubiquitin-protein ligase UPL3 
 gma-u.5   100783336   E3 ubiquitin-protein ligase UPL3 
 gma-u.5   100818972   E3 ubiquitin-protein ligase UPL3 
 gma-u.5   100791450   E3 ubiquitin-protein ligase UPL3 
 mtr-u.5   11439680   E3 ubiquitin-protein ligase UPL3 
 ppo-u.5   7494248   E3 ubiquitin-protein ligase UPL3 
 ppo-u.5   7453645   E3 ubiquitin-protein ligase UPL3 
 ath-u.5   KAK   HECT ubiquitin protein ligase family protein KAK 
 vvi-u.5   100266125   E3 ubiquitin-protein ligase UPL3 
 vvi-u.5   100264024   E3 ubiquitin-protein ligase UPL3 
 sly-u.5   101264868   E3 ubiquitin-protein ligase UPL3 
 sly-u.5   101247472   E3 ubiquitin-protein ligase UPL3 
 zma-u.5   103646651   E3 ubiquitin-protein ligase UPL3 
 zma-u.5   103626504   uncharacterized LOC103626504 

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Top 50 coexpressed genes to 100804501 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100804501 (gma-u.5 coexpression data)

CoexMap"100804501"


gmaLOC100804501 | Entrez gene ID : 100804501      
Species gma mtr ppo ath vvi sly zma hvu osa sot tae nta bra cit ghi bna bdi sbi cre
Paralog 6 1 2 1 2 2 2 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx04120 [list] [network] Ubiquitin mediated proteolysis (237 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (127 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (267 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (292 genes)  IEA  
GO:0005515 [list] [network] protein binding  (7243 genes)  IEA  
Protein XP_003537809.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  nucl_plas 4,  cyto 1,  plas 1,  cysk 1,  chlo 1,  E.R. 1,  cyto_pero 1  (predict for XP_003537809.1)
Subcellular
localization
TargetP
chlo 9,  mito 3  (predict for XP_003537809.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100804501

.
gma-r.7
for
100804501

.
gma-m.5
for
100804501

.
gma-u.5
for
100783336

.
gma-u.5
for
100818972

.
gma-u.5
for
100791450

.
mtr-u.5
for
11439680

.
ppo-u.5
for
7494248

.
ppo-u.5
for
7453645

.
ath-u.5
for
KAK

.
vvi-u.5
for
100266125

.
vvi-u.5
for
100264024

.
sly-u.5
for
101264868

.
sly-u.5
for
101247472

.
zma-u.5
for
103646651

.
zma-u.5
for
103626504

.


Ortholog ID: 4601
Species ath gma gma sly sly zma zma bra vvi vvi ppo ppo mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit bdi bdi nta nta
Symbol KAK LOC100818972 LOC100804501 LOC101264868 LOC101247472 LOC103626504 LOC103646651 LOC103835175 LOC100264024 LOC100266125 LOC7494248 LOC7453645 LOC11439680 LOC123187208 LOC123043381 LOC123401995 LOC123424533 LOC107923222 LOC107928922 LOC106389916 LOC106361540 CHLRE_07g312900v5 LOC8066469 LOC8085752 LOC102603044 LOC102598003 LOC102606600 LOC100826048 LOC100826319 LOC107782760 LOC107763564
Function* HECT ubiquitin protein ligase family protein KAK E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 uncharacterized LOC103626504 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3-like E3 ubiquitin-protein ligase UPL3-like E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 uncharacterized protein E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3-like E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3 E3 ubiquitin-protein ligase UPL3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 6
zma03083 Polycomb repressive complex 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma03018 RNA degradation 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi02010 ABC transporters 2
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 5
ghi04141 Protein processing in endoplasmic reticulum 3
ghi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 5
bna03420 Nucleotide excision repair 5
bna00020 Citrate cycle (TCA cycle) 2
bna00785 Lipoic acid metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 5
bna03420 Nucleotide excision repair 5
bna00020 Citrate cycle (TCA cycle) 2
bna00785 Lipoic acid metabolism 2
bna01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04120 Ubiquitin mediated proteolysis 5
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
sot00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 3
bdi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta04148 Efferocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830017 100818972 100804501 101264868 101247472 103626504 103646651 103835175 100264024 100266125 7494248 7453645 11439680 123187208 123043381 123401995 123424533 107923222 107928922 106389916 106361540 5726328 8066469 8085752 102603044 102598003 102606600 100826048 100826319 107782760 107763564
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