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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100805951   DNA polymerase delta small subunit 
 gma-r.7   100805951   DNA polymerase delta small subunit 
 gma-u.5   100780072   DNA polymerase delta small subunit 
 mtr-u.5   11437014   DNA polymerase delta small subunit 
 ppo-u.5   7479528   DNA polymerase delta small subunit 
 ath-u.5   POLD2   DNA polymerase delta small subunit 
 vvi-u.5   100241865   DNA polymerase delta small subunit 
 sly-u.5   101243681   DNA polymerase delta small subunit 
 osa-u.5   4331489   DNA polymerase delta small subunit-like 
 zma-u.5   100382167   DNA polymerase delta small subunit 

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Top 50 coexpressed genes to 100805951 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100805951 (gma-u.5 coexpression data)

CoexMap"100805951"


gmaLOC100805951 | Entrez gene ID : 100805951      
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03030 [list] [network] DNA replication (69 genes)
gmx03410 [list] [network] Base excision repair (77 genes)
gmx03420 [list] [network] Nucleotide excision repair (129 genes)
gmx03430 [list] [network] Mismatch repair (49 genes)
gmx03440 [list] [network] Homologous recombination (74 genes)
GO BP
GO:0006271 [list] [network] DNA strand elongation involved in DNA replication  (28 genes)  IEA  
GO:0006260 [list] [network] DNA replication  (274 genes)  IEA  
GO CC
GO:0043625 [list] [network] delta DNA polymerase complex  (8 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003554206.1 [sequence] [blastp]
XP_014627261.1 [sequence] [blastp]
XP_040868479.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_003554206.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_014627261.1)
nucl 5,  cyto 5,  cyto_nucl 5  (predict for XP_040868479.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003554206.1)
other 7  (predict for XP_014627261.1)
other 7  (predict for XP_040868479.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100805951
gma-r.7
for
100805951
gma-u.5
for
100780072
mtr-u.5
for
11437014
ppo-u.5
for
7479528
ath-u.5
for
POLD2
vvi-u.5
for
100241865
sly-u.5
for
101243681
osa-u.5
for
4331489
zma-u.5
for
100382167


Ortholog ID: 9431
Species gma gma mtr ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100780072 LOC100805951 LOC11437014 LOC7479528 POLD2 LOC103865926 LOC100241865 LOC107899677 LOC107948426 LOC111197870 LOC106391737 LOC102626465 LOC101243681 LOC102602022 LOC107791893 LOC107799905 LOC4331489 LOC100382167 LOC123093569 LOC123098837 LOC123449800 LOC8061443 LOC100831775 CHLRE_08g374050v5
Function* DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit-like DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit DNA polymerase delta small subunit uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 4
gma03083 Polycomb repressive complex 2
gma03030 DNA replication 2
gma03410 Base excision repair 2
gma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 3
gma01210 2-Oxocarboxylic acid metabolism 3
gma01230 Biosynthesis of amino acids 3
gma03082 ATP-dependent chromatin remodeling 2
gma03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 8
mtr03008 Ribosome biogenesis in eukaryotes 2
mtr03030 DNA replication 2
mtr03410 Base excision repair 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 11
ppo03440 Homologous recombination 4
ppo03420 Nucleotide excision repair 3
ppo03430 Mismatch repair 3
ppo03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 4
ath03410 Base excision repair 4
ath03030 DNA replication 3
ath03420 Nucleotide excision repair 3
ath03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 6
vvi03030 DNA replication 5
vvi03420 Nucleotide excision repair 5
vvi03410 Base excision repair 3
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 4
ghi03410 Base excision repair 4
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
bna03430 Mismatch repair 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00240 Pyrimidine metabolism 2
cit01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03420 Nucleotide excision repair 5
nta03410 Base excision repair 4
nta03430 Mismatch repair 3
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 5
nta03420 Nucleotide excision repair 5
nta03410 Base excision repair 4
nta03430 Mismatch repair 3
nta03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03030 DNA replication 3
osa03008 Ribosome biogenesis in eukaryotes 3
osa03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03410 Base excision repair 4
zma03082 ATP-dependent chromatin remodeling 3
zma03030 DNA replication 3
zma03420 Nucleotide excision repair 3
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 6
tae03082 ATP-dependent chromatin remodeling 5
tae03083 Polycomb repressive complex 5
tae03030 DNA replication 5
tae03410 Base excision repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03430 Mismatch repair 8
tae03083 Polycomb repressive complex 5
tae03030 DNA replication 5
tae03410 Base excision repair 5
tae03420 Nucleotide excision repair 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 5
sbi03440 Homologous recombination 3
sbi00240 Pyrimidine metabolism 3
sbi01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 3
bdi03410 Base excision repair 2
bdi03420 Nucleotide excision repair 2
bdi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 3
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100780072 100805951 11437014 7479528 818812 103865926 100241865 107899677 107948426 111197870 106391737 102626465 101243681 102602022 107791893 107799905 4331489 100382167 123093569 123098837 123449800 8061443 100831775 5719973
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