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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100790844   DNA cross-link repair protein SNM1 
 mtr-u.5   11439525   DNA cross-link repair protein SNM1 
 ppo-u.5   7466282   DNA cross-link repair protein SNM1 
 ath-u.5   SNM1   DNA repair metallo-beta-lactamase family protein 
 bra-r.6   103875283   DNA cross-link repair protein SNM1 
 bna-r.1   106349321   DNA cross-link repair protein SNM1 
 bna-r.1   106409662   DNA cross-link repair protein SNM1 
 cit-r.1   102610837   DNA cross-link repair protein SNM1 
 sot-r.1   102587753   DNA cross-link repair protein SNM1 
 nta-r.1   107776827   DNA cross-link repair protein SNM1-like 
 nta-r.1   107814303   DNA cross-link repair protein SNM1 
 osa-u.5   4335730   DNA cross-link repair protein SNM1 
 zma-u.5   100192920   uncharacterized LOC100192920 
 tae-r.2   123189110   DNA cross-link repair protein SNM1 
 tae-r.2   123045357   DNA cross-link repair protein SNM1 
 hvu-r.1   123426598   DNA cross-link repair protein SNM1 
 sbi-r.1   8072056   DNA cross-link repair protein SNM1 
 bdi-r.1   100832523   DNA cross-link repair protein SNM1 
 cre-r.1   CHLRE_12g513254v5   uncharacterized protein 

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Top 50 coexpressed genes to 100790844 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100790844 (gma-u.5 coexpression data)

CoexMap"100806273"


gmaLOC100806273 | Entrez gene ID : 100806273    
Species gma mtr ppo ath bra bna cit sot nta osa zma tae hvu sbi bdi cre ghi vvi sly
Paralog 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036297 [list] [network] interstrand cross-link repair  (13 genes)  IEA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (14 genes)  IEA  
GO CC
GO MF
GO:0035312 [list] [network] 5'-3' DNA exonuclease activity  (11 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (116 genes)  IEA  
Protein XP_040868830.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_040868830.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040868830.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100790844
mtr-u.5
for
11439525
ppo-u.5
for
7466282
ath-u.5
for
SNM1
bra-r.6
for
103875283
bna-r.1
for
106349321
bna-r.1
for
106409662
cit-r.1
for
102610837
sot-r.1
for
102587753
nta-r.1
for
107776827
nta-r.1
for
107814303
osa-u.5
for
4335730
zma-u.5
for
100192920
tae-r.2
for
123189110
tae-r.2
for
123045357
hvu-r.1
for
123426598
sbi-r.1
for
8072056
bdi-r.1
for
100832523
cre-r.1
for
CHLRE_12g513254v5


Ortholog ID: 12201
Species gma mtr ppo ath bra bna bna cit sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100790844 LOC11439525 LOC7466282 SNM1 LOC103875283 LOC106349321 LOC106409662 LOC102610837 LOC102587753 LOC107776827 LOC107814303 LOC4335730 LOC100192920 LOC123189110 LOC123045357 LOC123426598 LOC8072056 LOC100832523 CHLRE_12g513254v5
Function* DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA repair metallo-beta-lactamase family protein DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1-like DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized LOC100192920 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 DNA cross-link repair protein SNM1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03018 RNA degradation 2
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00230 Purine metabolism 3
sot00240 Pyrimidine metabolism 3
sot00480 Glutathione metabolism 3
sot01232 Nucleotide metabolism 3
sot03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
nta00950 Isoquinoline alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 4
tae00670 One carbon pool by folate 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00260 Glycine, serine and threonine metabolism 3
tae00670 One carbon pool by folate 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100790844 11439525 7466282 822280 103875283 106349321 106409662 102610837 102587753 107776827 107814303 4335730 100192920 123189110 123045357 123426598 8072056 100832523 5728512
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