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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100810446   carbon catabolite repressor protein 4 homolog 6 
 gma-r.7   100810446   carbon catabolite repressor protein 4 homolog 6 
 gma-m.5   100810446   carbon catabolite repressor protein 4 homolog 6 
 mtr-u.5   11433351   carbon catabolite repressor protein 4 homolog 6 
 ppo-u.5   7459006   carbon catabolite repressor protein 4 homolog 6 
 ath-u.5   AT5G11350   DNAse I-like superfamily protein 
 vvi-u.5   100254276   carbon catabolite repressor protein 4 homolog 6 
 sly-u.5   101244977   carbon catabolite repressor protein 4 homolog 6 
 osa-u.5   4327735   carbon catabolite repressor protein 4 homolog 6 
 zma-u.5   100273526   uncharacterized LOC100273526 

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Top 50 coexpressed genes to 100810446 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100810446 (gma-u.5 coexpression data)

CoexMap"100810446"


gmaLOC100810446 | Entrez gene ID : 100810446      
Species gma mtr ppo ath vvi sly osa zma hvu sot tae nta bra cit ghi bna bdi sbi cre
Paralog 3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (50 genes)  IEA  
Protein XP_003545500.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 3,  pero 1,  cyto_nucl 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_003545500.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_003545500.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100810446

.
gma-r.7
for
100810446

.
gma-m.5
for
100810446

.
mtr-u.5
for
11433351

.
ppo-u.5
for
7459006

.
ath-u.5
for
AT5G11350

.
vvi-u.5
for
100254276

.
sly-u.5
for
101244977

.
osa-u.5
for
4327735

.
zma-u.5
for
100273526

.


Ortholog ID: 11730
Species ath gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi cit bdi nta nta
Symbol AT5G11350 LOC100810446 LOC101244977 LOC4327735 LOC100273526 LOC103846728 LOC100254276 LOC7459006 LOC11433351 LOC123070094 LOC123078544 LOC123443857 LOC107918026 LOC107917798 LOC106391317 LOC106372412 LOC8054368 LOC102630461 LOC100838379 LOC107786137 LOC107774115
Function* DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 uncharacterized LOC100273526 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 2
tae00410 beta-Alanine metabolism 2
tae00640 Propanoate metabolism 2
tae01200 Carbon metabolism 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831006 100810446 101244977 4327735 100273526 103846728 100254276 7459006 11433351 123070094 123078544 123443857 107918026 107917798 106391317 106372412 8054368 102630461 100838379 107786137 107774115
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