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Orthologous genes in OrthoFinder**

Species Gene Description
 cit-r.1   102630461   carbon catabolite repressor protein 4 homolog 6 
 ath-u.5   AT5G11350   DNAse I-like superfamily protein 
 bra-r.6   103846728   carbon catabolite repressor protein 4 homolog 6 
 ghi-r.1   107917798   carbon catabolite repressor protein 4 homolog 6 
 ghi-r.1   107918026   carbon catabolite repressor protein 4 homolog 6 
 bna-r.1   106391317   carbon catabolite repressor protein 4 homolog 6 
 bna-r.1   106372412   carbon catabolite repressor protein 4 homolog 6 
 gma-u.5   100810446   carbon catabolite repressor protein 4 homolog 6 
 vvi-u.5   100254276   carbon catabolite repressor protein 4 homolog 6 
 ppo-u.5   7459006   carbon catabolite repressor protein 4 homolog 6 
 mtr-u.5   11433351   carbon catabolite repressor protein 4 homolog 6 
 sly-u.5   101244977   carbon catabolite repressor protein 4 homolog 6 
 nta-r.1   107786137   carbon catabolite repressor protein 4 homolog 6 
 nta-r.1   107774115   carbon catabolite repressor protein 4 homolog 6 
 osa-u.5   4327735   carbon catabolite repressor protein 4 homolog 6 
 zma-u.5   100273526   uncharacterized LOC100273526 
 tae-r.2   123078544   carbon catabolite repressor protein 4 homolog 6 
 tae-r.2   123070094   carbon catabolite repressor protein 4 homolog 6 
 tae-r.2   123061452   carbon catabolite repressor protein 4 homolog 6 
 hvu-r.1   123443857   carbon catabolite repressor protein 4 homolog 6 
 sbi-r.1   8054368   carbon catabolite repressor protein 4 homolog 6 
 bdi-r.1   100838379   carbon catabolite repressor protein 4 homolog 6 

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Top 50 coexpressed genes to 102630461 (cit-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 102630461 (cit-r.1 coexpression data)

CoexMap"102630461"


citLOC102630461 | Entrez gene ID : 102630461    
Species cit ath bra ghi bna gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 1 1 1 2 2 1 1 1 1 1 2 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0000175 [list] [network] 3'-5'-RNA exonuclease activity  (30 genes)  IEA  
Protein XP_006483303.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  chlo 3,  nucl_plas 3  (predict for XP_006483303.2)
Subcellular
localization
TargetP
chlo 8,  mito 6  (predict for XP_006483303.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

cit-r.1
for
102630461
ath-u.5
for
AT5G11350
bra-r.6
for
103846728
ghi-r.1
for
107917798
ghi-r.1
for
107918026
bna-r.1
for
106391317
bna-r.1
for
106372412
gma-u.5
for
100810446
vvi-u.5
for
100254276
ppo-u.5
for
7459006
mtr-u.5
for
11433351
sly-u.5
for
101244977
nta-r.1
for
107786137
nta-r.1
for
107774115
osa-u.5
for
4327735
zma-u.5
for
100273526
tae-r.2
for
123078544
tae-r.2
for
123070094
tae-r.2
for
123061452
hvu-r.1
for
123443857
sbi-r.1
for
8054368
bdi-r.1
for
100838379


Ortholog ID: 11730
Species cit ath bra ghi ghi bna bna gma vvi ppo mtr sly nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC102630461 AT5G11350 LOC103846728 LOC107917798 LOC107918026 LOC106391317 LOC106372412 LOC100810446 LOC100254276 LOC7459006 LOC11433351 LOC101244977 LOC107786137 LOC107774115 LOC4327735 LOC100273526 LOC123078544 LOC123070094 LOC123061452 LOC123443857 LOC8054368 LOC100838379
Function* carbon catabolite repressor protein 4 homolog 6 DNAse I-like superfamily protein carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 uncharacterized LOC100273526 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6 carbon catabolite repressor protein 4 homolog 6
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03015 mRNA surveillance pathway 3
bra00970 Aminoacyl-tRNA biosynthesis 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04136 Autophagy - other 3
ghi04518 Integrin signaling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03410 Base excision repair 2
bna03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 4
vvi03013 Nucleocytoplasmic transport 2
vvi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 3
ppo04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00500 Starch and sucrose metabolism 5
mtr04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 2
tae00410 beta-Alanine metabolism 2
tae00640 Propanoate metabolism 2
tae01200 Carbon metabolism 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03040 Spliceosome 3
bdi03015 mRNA surveillance pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 102630461 831006 103846728 107917798 107918026 106391317 106372412 100810446 100254276 7459006 11433351 101244977 107786137 107774115 4327735 100273526 123078544 123070094 123061452 123443857 8054368 100838379
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