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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100814083   DNA-directed RNA polymerase I subunit 2 
 gma-r.7   100814083   DNA-directed RNA polymerase I subunit 2 
 gma-m.5   100814083   DNA-directed RNA polymerase I subunit 2 
 gma-u.5   100812761   DNA-directed RNA polymerase I subunit 2 
 mtr-u.5   11440716   DNA-directed RNA polymerase I subunit 2 
 ppo-u.5   7455807   DNA-directed RNA polymerase I subunit 2 
 ath-u.5   NRPA2   nuclear RNA polymerase A2 
 vvi-u.5   100241130   DNA-directed RNA polymerase I subunit 2 
 sly-u.5   101261746   DNA-directed RNA polymerase I subunit 2 
 osa-u.5   9270457   DNA-directed RNA polymerase I subunit 2 
 zma-u.5   103643410   DNA-directed RNA polymerase I subunit 2 

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Top 50 coexpressed genes to 100814083 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100814083 (gma-u.5 coexpression data)

CoexMap"100814083"


gmaLOC100814083 | Entrez gene ID : 100814083      
Species gma mtr ppo ath vvi sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 4 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03020 [list] [network] RNA polymerase (81 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (402 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (27 genes)  IEA  
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0032549 [list] [network] ribonucleoside binding  (8 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (3517 genes)  IEA  
Protein XP_003550091.1 [sequence] [blastp]
XP_006601019.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 3,  cyto_pero 3,  cyto_E.R. 3  (predict for XP_003550091.1)
cyto 6,  chlo 2,  nucl 1,  extr 1,  cysk 1,  cysk_nucl 1  (predict for XP_006601019.1)
Subcellular
localization
TargetP
other 7  (predict for XP_003550091.1)
other 7,  mito 3  (predict for XP_006601019.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100814083

.
gma-r.7
for
100814083

.
gma-m.5
for
100814083

.
gma-u.5
for
100812761

.
mtr-u.5
for
11440716

.
ppo-u.5
for
7455807

.
ath-u.5
for
NRPA2

.
vvi-u.5
for
100241130

.
sly-u.5
for
101261746

.
osa-u.5
for
9270457

.
zma-u.5
for
103643410

.


Ortholog ID: 10491
Species ath gma gma sly osa zma bra vvi ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol NRPA2 LOC100814083 LOC100812761 LOC101261746 LOC9270457 LOC103643410 LOC103828917 LOC100241130 LOC7455807 LOC11440716 LOC123046729 LOC123181150 LOC123432138 LOC121207620 LOC107915173 LOC106421799 LOC106355081 CHLRE_07g322176v5 LOC8085233 LOC102579628 LOC102611701 LOC100834726 LOC107807249 LOC107817344
Function* nuclear RNA polymerase A2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 uncharacterized protein DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03020 RNA polymerase 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03018 RNA degradation 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839872 100814083 100812761 101261746 9270457 103643410 103828917 100241130 7455807 11440716 123046729 123181150 123432138 121207620 107915173 106421799 106355081 5726408 8085233 102579628 102611701 100834726 107807249 107817344
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