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Orthologous genes in OrthoFinder**

Species Gene Description
 bdi-r.1   100834726   DNA-directed RNA polymerase I subunit 2 
 tae-r.2   123181150   DNA-directed RNA polymerase I subunit 2 
 tae-r.2   123122163   DNA-directed RNA polymerase I subunit 2 
 tae-r.2   123046729   DNA-directed RNA polymerase I subunit 2 
 hvu-r.1   123432138   DNA-directed RNA polymerase I subunit 2 
 osa-u.5   9270457   DNA-directed RNA polymerase I subunit 2 
 zma-u.5   103643410   DNA-directed RNA polymerase I subunit 2 
 sbi-r.1   8085233   DNA-directed RNA polymerase I subunit 2 
 ath-u.5   NRPA2   nuclear RNA polymerase A2 
 gma-u.5   100814083   DNA-directed RNA polymerase I subunit 2 
 gma-u.5   100812761   DNA-directed RNA polymerase I subunit 2 
 sly-u.5   101261746   DNA-directed RNA polymerase I subunit 2 
 bra-r.6   103828917   DNA-directed RNA polymerase I subunit 2 
 vvi-u.5   100241130   DNA-directed RNA polymerase I subunit 2 
 ppo-u.5   7455807   DNA-directed RNA polymerase I subunit 2 
 mtr-u.5   11440716   DNA-directed RNA polymerase I subunit 2 
 ghi-r.1   121207620   DNA-directed RNA polymerase I subunit 2 
 ghi-r.1   107915173   DNA-directed RNA polymerase I subunit 2 
 bna-r.1   106355081   DNA-directed RNA polymerase I subunit 2 
 bna-r.1   106421799   DNA-directed RNA polymerase I subunit 2 
 sot-r.1   102579628   DNA-directed RNA polymerase I subunit 2 
 cit-r.1   102611701   DNA-directed RNA polymerase I subunit 2 
 nta-r.1   107817344   DNA-directed RNA polymerase I subunit 2-like 
 nta-r.1   107807249   DNA-directed RNA polymerase I subunit 2 
 cre-r.1   CHLRE_07g322176v5   uncharacterized protein 

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Top 50 coexpressed genes to 100834726 (bdi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100834726 (bdi-r.1 coexpression data)

CoexMap"100834726"


bdiLOC100834726 | Entrez gene ID : 100834726      
Species bdi tae hvu osa zma sbi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 3 1 1 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bdi03020 [list] [network] RNA polymerase (60 genes)
GO BP
GO:0006351 [list] [network] DNA-templated transcription  (230 genes)  IEA  
GO CC
GO:0005736 [list] [network] RNA polymerase I complex  (19 genes)  IEA  
GO:0005634 [list] [network] nucleus  (2880 genes)  IEA  
GO MF
GO:0032549 [list] [network] ribonucleoside binding  (8 genes)  IEA  
GO:0003899 [list] [network] DNA-directed RNA polymerase activity  (34 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (1744 genes)  IEA  
Protein XP_003574126.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_003574126.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003574126.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bdi-r.1
for
100834726
tae-r.2
for
123181150
tae-r.2
for
123122163
tae-r.2
for
123046729
hvu-r.1
for
123432138
osa-u.5
for
9270457
zma-u.5
for
103643410
sbi-r.1
for
8085233
ath-u.5
for
NRPA2
gma-u.5
for
100814083
gma-u.5
for
100812761
sly-u.5
for
101261746
bra-r.6
for
103828917
vvi-u.5
for
100241130
ppo-u.5
for
7455807
mtr-u.5
for
11440716
ghi-r.1
for
121207620
ghi-r.1
for
107915173
bna-r.1
for
106355081
bna-r.1
for
106421799
sot-r.1
for
102579628
cit-r.1
for
102611701
nta-r.1
for
107817344
nta-r.1
for
107807249
cre-r.1
for
CHLRE_07g322176v5


Ortholog ID: 10491
Species bdi tae tae tae hvu osa zma sbi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC100834726 LOC123181150 LOC123122163 LOC123046729 LOC123432138 LOC9270457 LOC103643410 LOC8085233 NRPA2 LOC100814083 LOC100812761 LOC101261746 LOC103828917 LOC100241130 LOC7455807 LOC11440716 LOC121207620 LOC107915173 LOC106355081 LOC106421799 LOC102579628 LOC102611701 LOC107817344 LOC107807249 CHLRE_07g322176v5
Function* DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 nuclear RNA polymerase A2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2 DNA-directed RNA polymerase I subunit 2-like DNA-directed RNA polymerase I subunit 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 3
tae03040 Spliceosome 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03020 RNA polymerase 6
tae03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 3
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
osa03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 4
sbi00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 5
gma03020 RNA polymerase 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
gma03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 4
ppo03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 5
mtr03018 RNA degradation 2
mtr03020 RNA polymerase 2
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03020 RNA polymerase 4
ghi00240 Pyrimidine metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03020 RNA polymerase 2
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
cit03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 5
nta03008 Ribosome biogenesis in eukaryotes 4
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 6
nta03013 Nucleocytoplasmic transport 4
nta03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100834726 123181150 123122163 123046729 123432138 9270457 103643410 8085233 839872 100814083 100812761 101261746 103828917 100241130 7455807 11440716 121207620 107915173 106355081 106421799 102579628 102611701 107817344 107807249 5726408
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