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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100814416   RNA polymerase I-specific transcription initiation factor RRN3 
 gma-r.7   100814416   RNA polymerase I-specific transcription initiation factor RRN3 
 gma-m.5   100814416   RNA polymerase I-specific transcription initiation factor RRN3 
 gma-u.5   100812298   RNA polymerase I-specific transcription initiation factor RRN3 
 mtr-u.5   25494034   RNA polymerase I-specific transcription initiation factor RRN3 
 ppo-u.5   7480445   uncharacterized LOC7480445 
 ath-u.5   AT2G34750   RNA polymerase I specific transcription initiation factor RRN3 protein 
 ath-u.5   AT1G30590   RNA polymerase I specific transcription initiation factor RRN3 protein 
 vvi-u.5   100248167   uncharacterized LOC100248167 
 vvi-u.5   100248166   RNA polymerase I-specific transcription initiation factor rrn3 
 sly-u.5   101266087   uncharacterized LOC101266087 
 osa-u.5   4341897   uncharacterized LOC4341897 
 zma-u.5   100272544   RNA polymerase I specific transcription initiation factor RRN3 protein 

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Top 50 coexpressed genes to 100814416 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100814416 (gma-u.5 coexpression data)

CoexMap"100814416"


gmaLOC100814416 | Entrez gene ID : 100814416      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 4 1 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006361 [list] [network] transcription initiation at RNA polymerase I promoter  (4 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (5531 genes)  IEA  
GO MF
GO:0001042 [list] [network] RNA polymerase I core binding  (2 genes)  IEA  
GO:0001181 [list] [network] RNA polymerase I general transcription initiation factor activity  (2 genes)  IEA  
Protein XP_003547884.1 [sequence] [blastp]
XP_006599254.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 3,  cyto_plas 3  (predict for XP_003547884.1)
cyto 5,  nucl 3,  cyto_plas 3  (predict for XP_006599254.1)
Subcellular
localization
TargetP
other 9  (predict for XP_003547884.1)
other 9  (predict for XP_006599254.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100814416
gma-r.7
for
100814416
gma-m.5
for
100814416
gma-u.5
for
100812298
mtr-u.5
for
25494034
ppo-u.5
for
7480445
ath-u.5
for
AT2G34750
ath-u.5
for
AT1G30590
vvi-u.5
for
100248167
vvi-u.5
for
100248166
sly-u.5
for
101266087
osa-u.5
for
4341897
zma-u.5
for
100272544


Ortholog ID: 4357
Species gma gma mtr ppo ath bra bra vvi vvi ghi ghi bna bna cit cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100812298 LOC100814416 LOC25494034 LOC7480445 AT1G30590 LOC103865352 LOC103867422 LOC100248166 LOC100248167 LOC107951635 LOC107949552 LOC111213843 LOC106392368 LOC102627181 LOC102625469 LOC101266087 LOC102602356 LOC107816212 LOC107781665 LOC4341897 LOC100272544 LOC123163919 LOC123136804 LOC123413502 LOC8065105 LOC100827862 CHLRE_03g207950v5
Function* RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 uncharacterized LOC7480445 RNA polymerase I specific transcription initiation factor RRN3 protein RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor rrn3 uncharacterized LOC100248167 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor rrn3-like RNA polymerase I-specific transcription initiation factor RRN3 uncharacterized LOC102627181 uncharacterized LOC102625469 uncharacterized LOC101266087 RNA polymerase I-specific transcription initiation factor RRN3 uncharacterized LOC107816212 uncharacterized LOC107781665 uncharacterized LOC4341897 RNA polymerase I specific transcription initiation factor RRN3 protein RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 RNA polymerase I-specific transcription initiation factor RRN3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 8
ppo00240 Pyrimidine metabolism 2
ppo01232 Nucleotide metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 6
vvi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 9
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 6
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 5
cit03015 mRNA surveillance pathway 3
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta00230 Purine metabolism 2
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 5
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00340 Histidine metabolism 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae03460 Fanconi anemia pathway 3
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 3
sbi04120 Ubiquitin mediated proteolysis 2
sbi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100812298 100814416 25494034 7480445 839939 103865352 103867422 100248166 100248167 107951635 107949552 111213843 106392368 102627181 102625469 101266087 102602356 107816212 107781665 4341897 100272544 123163919 123136804 123413502 8065105 100827862 5718811
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