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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816122   zeta-carotene desaturase, chloroplastic/chromoplastic 
 gma-r.7   100816122   zeta-carotene desaturase, chloroplastic/chromoplastic 
 gma-u.5   100776502   zeta-carotene desaturase, chloroplastic/chromoplastic 
 mtr-u.5   11415648   zeta-carotene desaturase, chloroplastic/chromoplastic 
 ppo-u.5   7473341   zeta-carotene desaturase, chloroplastic/chromoplastic 
 ppo-u.5   18098943   zeta-carotene desaturase, chloroplastic/chromoplastic 
 ath-u.5   ZDS   zeta-carotene desaturase 
 vvi-u.5   100245154   zeta-carotene desaturase, chloroplastic/chromoplastic 
 sly-u.5   zds   zeta-carotene desaturase 
 osa-u.5   4342680   zeta-carotene desaturase, chloroplastic/chromoplastic 
 zma-u.5   542604   zeta carotene desaturase candidate 

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Top 50 coexpressed genes to 100816122 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816122 (gma-u.5 coexpression data)

CoexMap"100816122"


gmaLOC100816122 | Entrez gene ID : 100816122      
Species gma mtr ppo ath vvi sly osa zma hvu bna cit bra ghi sbi bdi nta tae cre sot
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00906 [list] [network] Carotenoid biosynthesis (72 genes)
GO BP
GO:0016120 [list] [network] carotene biosynthetic process  (5 genes)  IEA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (30 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1168 genes)  IEA  
GO MF
GO:0016719 [list] [network] 9,9'-di-cis-zeta-carotene desaturase activity  (2 genes)  IEA  
Protein XP_003556484.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_003556484.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_003556484.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816122
gma-r.7
for
100816122
gma-u.5
for
100776502
mtr-u.5
for
11415648
ppo-u.5
for
7473341
ppo-u.5
for
18098943
ath-u.5
for
ZDS
vvi-u.5
for
100245154
sly-u.5
for
zds
osa-u.5
for
4342680
zma-u.5
for
542604


Ortholog ID: 8439
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC100776502 LOC100816122 LOC11415648 LOC7473341 LOC18098943 ZDS LOC103849152 LOC100245154 LOC107920020 LOC107888796 LOC106427407 LOC106453079 LOC102577969 zds LOC102598493 LOC107772271 LOC107830915 LOC4342680 LOC542604 LOC100270658 LOC123052650 LOC123425989 LOC8078415 LOC100836583 CHLRE_07g314150v5
Function* zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic ZDS zeta-carotene desaturase zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic-like zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta carotene desaturase candidate zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic zeta-carotene desaturase, chloroplastic/chromoplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 6
gma03060 Protein export 2
gma03010 Ribosome 2
gma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00906 Carotenoid biosynthesis 5
gma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr00906 Carotenoid biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 5
ppo00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00260 Glycine, serine and threonine metabolism 2
ppo00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
ath00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 2
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00906 Carotenoid biosynthesis 3
vvi00500 Starch and sucrose metabolism 3
vvi00460 Cyanoamino acid metabolism 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 4
ghi03060 Protein export 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01240 Biosynthesis of cofactors 8
bna00860 Porphyrin metabolism 4
bna00010 Glycolysis / Gluconeogenesis 2
bna00053 Ascorbate and aldarate metabolism 2
bna00071 Fatty acid degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00906 Carotenoid biosynthesis 2
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00970 Aminoacyl-tRNA biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 8
nta00970 Aminoacyl-tRNA biosynthesis 4
nta00860 Porphyrin metabolism 3
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 8
nta00860 Porphyrin metabolism 4
nta00270 Cysteine and methionine metabolism 2
nta00920 Sulfur metabolism 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00906 Carotenoid biosynthesis 3
osa00053 Ascorbate and aldarate metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00561 Glycerolipid metabolism 3
zma00566 Sulfoquinovose metabolism 3
zma00906 Carotenoid biosynthesis 2
zma03060 Protein export 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 6
tae03013 Nucleocytoplasmic transport 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 6
tae00260 Glycine, serine and threonine metabolism 5
tae00630 Glyoxylate and dicarboxylate metabolism 5
tae01200 Carbon metabolism 5
tae01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00900 Terpenoid backbone biosynthesis 4
hvu00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00906 Carotenoid biosynthesis 4
cre01230 Biosynthesis of amino acids 3
cre00900 Terpenoid backbone biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100776502 100816122 11415648 7473341 18098943 819647 103849152 100245154 107920020 107888796 106427407 106453079 102577969 543629 102598493 107772271 107830915 4342680 542604 100270658 123052650 123425989 8078415 100836583 5726519
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