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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100816860   YTH domain-containing protein ECT4 
 gma-r.7   100816860   YTH domain-containing protein ECT4 
 gma-m.5   100816860   YTH domain-containing protein ECT4 
 gma-u.5   100779278   YTH domain-containing protein ECT4 
 mtr-u.5   11425089   YTH domain-containing protein ECT4 
 ppo-u.5   7497755   YTH domain-containing protein ECT4 
 ppo-u.5   7497296   YTH domain-containing protein ECT4 
 ath-u.5   ECT5   evolutionarily conserved C-terminal region 5 
 bra-r.6   103849736   YTH domain-containing protein ECT1 
 bra-r.6   103870199   YTH domain-containing protein ECT3 
 vvi-u.5   100241633   YTH domain-containing protein ECT4 
 vvi-u.5   100248968   YTH domain-containing protein ECT1 
 vvi-u.5   100249606   YTH domain-containing protein ECT4 
 ghi-r.1   107958475   YTH domain-containing protein ECT4 
 ghi-r.1   107906375   YTH domain-containing protein ECT4 
 ghi-r.1   107925151   YTH domain-containing protein ECT4 
 bna-r.1   125580310   YTH domain-containing protein ECT1-like 
 bna-r.1   111211927   YTH domain-containing protein ECT3 
 bna-r.1   106452344   YTH domain-containing protein ECT3-like 
 cit-r.1   102628125   YTH domain-containing protein ECT2 
 cit-r.1   102619639   YTH domain-containing protein ECT4 
 sly-u.5   101248578   YTH domain-containing protein ECT3 
 sot-r.1   102602201   uncharacterized LOC102602201 
 nta-r.1   107764011   YTH domain-containing protein ECT4-like 
 nta-r.1   107805582   YTH domain-containing protein ECT4 
 osa-u.5   4344968   YTH domain-containing protein ECT1 
 osa-u.5   4346283   YTH domain-containing protein ECT1 
 osa-u.5   4336934   YTH domain-containing protein ECT1 
 zma-u.5   103640222   uncharacterized LOC103640222 
 zma-u.5   100502368   evolutionarily conserved C-terminal region 5 
 zma-u.5   100382673   evolutionarily conserved C-terminal region 10 
 tae-r.2   123105822   YTH domain-containing protein ECT4 
 tae-r.2   123152652   YTH domain-containing protein ECT2 
 tae-r.2   123154873   YTH domain-containing protein ECT1 
 hvu-r.1   123407161   YTH domain-containing protein ECT1-like 
 hvu-r.1   123452556   YTH domain-containing protein ECT4-like 
 sbi-r.1   8058007   uncharacterized LOC8058007 
 sbi-r.1   8072165   uncharacterized LOC8072165 
 sbi-r.1   8072313   uncharacterized LOC8072313 
 bdi-r.1   100846631   uncharacterized LOC100846631 
 bdi-r.1   100840334   uncharacterized LOC100840334 

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Top 50 coexpressed genes to 100816860 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100816860 (gma-u.5 coexpression data)

CoexMap"100816860"


gmaLOC100816860 | Entrez gene ID : 100816860      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 1 2 3 3 3 2 1 1 2 3 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061157 [list] [network] mRNA destabilization  (49 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (563 genes)  IEA  
Protein XP_003529709.1 [sequence] [blastp]
XP_006582969.1 [sequence] [blastp]
XP_006582970.1 [sequence] [blastp]
XP_014633077.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  vacu 1  (predict for XP_003529709.1)
nucl 9,  chlo 1,  vacu 1  (predict for XP_006582969.1)
nucl 9,  chlo 1,  vacu 1  (predict for XP_006582970.1)
nucl 9,  chlo 1,  vacu 1  (predict for XP_014633077.1)
Subcellular
localization
TargetP
other 8  (predict for XP_003529709.1)
other 9  (predict for XP_006582969.1)
other 9  (predict for XP_006582970.1)
other 7,  chlo 3  (predict for XP_014633077.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100816860
gma-r.7
for
100816860
gma-m.5
for
100816860
gma-u.5
for
100779278
mtr-u.5
for
11425089
ppo-u.5
for
7497755
ppo-u.5
for
7497296
ath-u.5
for
ECT5
bra-r.6
for
103849736
bra-r.6
for
103870199
vvi-u.5
for
100241633
vvi-u.5
for
100248968
vvi-u.5
for
100249606
ghi-r.1
for
107958475
ghi-r.1
for
107906375
ghi-r.1
for
107925151
bna-r.1
for
125580310
bna-r.1
for
111211927
bna-r.1
for
106452344
cit-r.1
for
102628125
cit-r.1
for
102619639
sly-u.5
for
101248578
sot-r.1
for
102602201
nta-r.1
for
107764011
nta-r.1
for
107805582
osa-u.5
for
4344968
osa-u.5
for
4346283
osa-u.5
for
4336934
zma-u.5
for
103640222
zma-u.5
for
100502368
zma-u.5
for
100382673
tae-r.2
for
123105822
tae-r.2
for
123152652
tae-r.2
for
123154873
hvu-r.1
for
123407161
hvu-r.1
for
123452556
sbi-r.1
for
8058007
sbi-r.1
for
8072165
sbi-r.1
for
8072313
bdi-r.1
for
100846631
bdi-r.1
for
100840334


Ortholog ID: 3451
Species gma gma mtr ppo ppo ath bra bra vvi vvi vvi ghi ghi ghi bna bna bna cit cit sly sot nta nta osa osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol LOC100816860 LOC100779278 LOC11425089 LOC7497755 LOC7497296 ECT5 LOC103849736 LOC103870199 LOC100241633 LOC100248968 LOC100249606 LOC107906375 LOC107925151 LOC107930379 LOC125580310 LOC106452344 BNAA01G30090D LOC102628125 LOC102619639 LOC101248578 LOC102602201 LOC107764011 LOC107805582 LOC4344968 LOC4346283 LOC4336934 LOC103640222 LOC100502368 LOC100381631 LOC123105822 LOC123152652 LOC123180059 LOC123407161 LOC123452556 LOC8058007 LOC8072165 LOC8072313 LOC100846631 LOC100840334
Function* YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 evolutionarily conserved C-terminal region 5 YTH domain-containing protein ECT1 YTH domain-containing protein ECT3 YTH domain-containing protein ECT4 YTH domain-containing protein ECT1 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT4 YTH domain-containing protein ECT1-like YTH domain-containing protein ECT3-like YTH domain-containing protein ECT1 YTH domain-containing protein ECT2 YTH domain-containing protein ECT4 YTH domain-containing protein ECT3 uncharacterized LOC102602201 YTH domain-containing protein ECT4-like YTH domain-containing protein ECT4 YTH domain-containing protein ECT1 YTH domain-containing protein ECT1 YTH domain-containing protein ECT1 uncharacterized LOC103640222 evolutionarily conserved C-terminal region 5 uncharacterized LOC100381631 YTH domain-containing protein ECT4 YTH domain-containing protein ECT2 YTH domain-containing protein ECT2 YTH domain-containing protein ECT1-like YTH domain-containing protein ECT4-like uncharacterized LOC8058007 uncharacterized LOC8072165 uncharacterized LOC8072313 uncharacterized LOC100846631 uncharacterized LOC100840334
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 3
gma00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 3
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 5
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
ghi04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
ghi04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 5
ghi04382 Cornified envelope formation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
nta00564 Glycerophospholipid metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 2
osa04130 SNARE interactions in vesicular transport 2
osa04145 Phagosome 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 2
osa03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 4
zma04142 Lysosome 3
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03018 RNA degradation 3
tae00510 N-Glycan biosynthesis 2
tae00513 Various types of N-glycan biosynthesis 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu03015 mRNA surveillance pathway 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
bdi04120 Ubiquitin mediated proteolysis 3
bdi03083 Polycomb repressive complex 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100816860 100779278 11425089 7497755 7497296 820492 103849736 103870199 100241633 100248968 100249606 107906375 107925151 107930379 125580310 106452344 106377510 102628125 102619639 101248578 102602201 107764011 107805582 4344968 4346283 4336934 103640222 100502368 100381631 123105822 123152652 123180059 123407161 123452556 8058007 8072165 8072313 100846631 100840334
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