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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100817882   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 gma-r.7   100817882   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 gma-u.5   100809589   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 mtr-u.5   11422886   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ppo-u.5   112323801   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ath-u.5   AT4G13070   RNA-binding CRS1 / YhbY (CRM) domain protein 
 bra-r.6   103833341   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 vvi-u.5   100252943   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107920552   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107913563   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 ghi-r.1   107893993   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bna-r.1   106423624   uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like 
 bna-r.1   106416015   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 cit-r.1   102628680   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sly-u.5   101258700   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sot-r.1   102585167   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107803839   putative CRM domain-containing protein At3g25440, chloroplastic 
 nta-r.1   107800342   uncharacterized LOC107800342 
 nta-r.1   107782523   uncharacterized LOC107782523 
 osa-u.5   4340839   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 zma-u.5   732768   RNA-binding CRS1 / YhbY (CRM) domain protein 
 tae-r.2   123160134   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 tae-r.2   123168134   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 tae-r.2   123150389   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 hvu-r.1   123410208   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 sbi-r.1   8073672   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 
 bdi-r.1   100845271   uncharacterized CRM domain-containing protein At3g25440, chloroplastic 

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Top 50 coexpressed genes to 100817882 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100817882 (gma-u.5 coexpression data)

CoexMap"100817882"


gmaLOC100817882 | Entrez gene ID : 100817882      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 1 1 1 3 2 1 1 1 3 1 1 3 1 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (2019 genes)  IEA  
Protein XP_014631386.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  extr 3  (predict for XP_014631386.2)
Subcellular
localization
TargetP
scret 9  (predict for XP_014631386.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100817882
gma-r.7
for
100817882
gma-u.5
for
100809589
mtr-u.5
for
11422886
ppo-u.5
for
112323801
ath-u.5
for
AT4G13070
bra-r.6
for
103833341
vvi-u.5
for
100252943
ghi-r.1
for
107920552
ghi-r.1
for
107913563
ghi-r.1
for
107893993
bna-r.1
for
106423624
bna-r.1
for
106416015
cit-r.1
for
102628680
sly-u.5
for
101258700
sot-r.1
for
102585167
nta-r.1
for
107803839
nta-r.1
for
107800342
nta-r.1
for
107782523
osa-u.5
for
4340839
zma-u.5
for
732768
tae-r.2
for
123160134
tae-r.2
for
123168134
tae-r.2
for
123150389
hvu-r.1
for
123410208
sbi-r.1
for
8073672
bdi-r.1
for
100845271


Ortholog ID: 9569
Species gma gma mtr ppo ath bra vvi ghi ghi ghi bna bna cit sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol LOC100817882 LOC100809589 LOC11422886 LOC112323801 AT4G13070 LOC103833341 LOC100252943 LOC107920552 LOC107913563 LOC107893993 LOC106423624 LOC106416015 LOC102628680 LOC101258700 LOC102585167 LOC107803839 LOC107800342 LOC107782523 LOC4340839 LOC732768 LOC123160134 LOC123168134 LOC123150389 LOC123410208 LOC8073672 LOC100845271
Function* uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic-like uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic putative CRM domain-containing protein At3g25440, chloroplastic uncharacterized LOC107800342 uncharacterized LOC107782523 uncharacterized CRM domain-containing protein At3g25440, chloroplastic RNA-binding CRS1 / YhbY (CRM) domain protein uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic uncharacterized CRM domain-containing protein At3g25440, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00220 Arginine biosynthesis 4
gma01230 Biosynthesis of amino acids 3
gma00250 Alanine, aspartate and glutamate metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
gma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 4
ghi04518 Integrin signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 4
ghi04518 Integrin signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04517 IgSF CAM signaling 4
ghi04518 Integrin signaling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 2
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
bdi03018 RNA degradation 3
bdi03010 Ribosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100817882 100809589 11422886 112323801 826921 103833341 100252943 107920552 107913563 107893993 106423624 106416015 102628680 101258700 102585167 107803839 107800342 107782523 4340839 732768 123160134 123168134 123150389 123410208 8073672 100845271
The preparation time of this page was 4.0 [sec].