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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100818301   50S ribosomal protein HLP, mitochondrial 
 gma-r.7   100818301   50S ribosomal protein HLP, mitochondrial 
 gma-m.5   100818301   50S ribosomal protein HLP, mitochondrial 
 gma-u.5   100527495   uncharacterized LOC100527495 
 mtr-u.5   11433704   50S ribosomal protein HLP, mitochondrial 
 mtr-u.5   11442530   50S ribosomal protein HLP, mitochondrial 
 ppo-u.5   7475377   50S ribosomal protein HLP, mitochondrial 
 ath-u.5   AT5G46160   Ribosomal protein L14p/L23e family protein 
 bra-r.6   103839624   50S ribosomal protein HLP, mitochondrial 
 bra-r.6   103827751   50S ribosomal protein HLP, mitochondrial 
 vvi-u.5   100241180   large ribosomal subunit protein uL14mz 
 ghi-r.1   121229379   50S ribosomal protein HLP, mitochondrial 
 ghi-r.1   107905974   50S ribosomal protein HLP, mitochondrial 
 bna-r.1   125578276   50S ribosomal protein HLP, mitochondrial-like 
 bna-r.1   106396997   50S ribosomal protein HLP, mitochondrial-like 
 bna-r.1   106367635   50S ribosomal protein HLP, mitochondrial-like 
 cit-r.1   102619758   50S ribosomal protein HLP, mitochondrial-like 
 cit-r.1   102608339   50S ribosomal protein HLP, mitochondrial-like 
 cit-r.1   102619048   50S ribosomal protein HLP, mitochondrial 
 sly-u.5   101260032   large ribosomal subunit protein uL14mz 
 sot-r.1   102590369   50S ribosomal protein HLP, mitochondrial-like 
 sot-r.1   102592234   50S ribosomal protein HLP, mitochondrial-like 
 nta-r.1   107796434   large ribosomal subunit protein uL14mz 
 nta-r.1   107783837   large ribosomal subunit protein uL14mz 
 osa-u.5   4352797   large ribosomal subunit protein uL14mz 
 zma-u.5   103629793   50S ribosomal protein L14, mitochondrial-like 
 zma-u.5   100282366   Ribosomal protein L14p/L23e superfamily protein 
 tae-r.2   123190961   50S ribosomal protein HLP, mitochondrial 
 tae-r.2   123042651   50S ribosomal protein HLP, mitochondrial 
 tae-r.2   123055114   50S ribosomal protein HLP, mitochondrial 
 sbi-r.1   8084415   50S ribosomal protein HLP, mitochondrial 
 bdi-r.1   100827819   50S ribosomal protein HLP, mitochondrial 

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Top 50 coexpressed genes to 100818301 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100818301 (gma-u.5 coexpression data)

CoexMap"100818301"


gmaLOC100818301 | Entrez gene ID : 100818301      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae sbi bdi cre hvu
Paralog 4 2 1 1 2 1 2 3 3 1 2 2 1 2 3 1 1 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx03010 [list] [network] Ribosome (1072 genes)
GO BP
GO:0006412 [list] [network] translation  (852 genes)  IEA  
GO CC
GO:0005762 [list] [network] mitochondrial large ribosomal subunit  (50 genes)  IEA  
GO:0005840 [list] [network] ribosome  (633 genes)  IEA  
GO MF
GO:0070180 [list] [network] large ribosomal subunit rRNA binding  (17 genes)  IEA  
GO:0003735 [list] [network] structural constituent of ribosome  (610 genes)  IEA  
Protein XP_003532103.1 [sequence] [blastp]
XP_003532104.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  mito 2  (predict for XP_003532103.1)
chlo 7,  mito 2  (predict for XP_003532104.1)
Subcellular
localization
TargetP
mito 7,  chlo 5  (predict for XP_003532103.1)
mito 7,  chlo 5  (predict for XP_003532104.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100818301
gma-r.7
for
100818301
gma-m.5
for
100818301
gma-u.5
for
100527495
mtr-u.5
for
11433704
mtr-u.5
for
11442530
ppo-u.5
for
7475377
ath-u.5
for
AT5G46160
bra-r.6
for
103839624
bra-r.6
for
103827751
vvi-u.5
for
100241180
ghi-r.1
for
121229379
ghi-r.1
for
107905974
bna-r.1
for
125578276
bna-r.1
for
106396997
bna-r.1
for
106367635
cit-r.1
for
102619758
cit-r.1
for
102608339
cit-r.1
for
102619048
sly-u.5
for
101260032
sot-r.1
for
102590369
sot-r.1
for
102592234
nta-r.1
for
107796434
nta-r.1
for
107783837
osa-u.5
for
4352797
zma-u.5
for
103629793
zma-u.5
for
100282366
tae-r.2
for
123190961
tae-r.2
for
123042651
tae-r.2
for
123055114
sbi-r.1
for
8084415
bdi-r.1
for
100827819


Ortholog ID: 3735
Species gma gma mtr mtr ppo ath bra bra vvi ghi ghi ghi bna bna bna cit cit cit sly sot sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC100818301 LOC100527495 LOC11433704 LOC11442530 LOC7475377 AT5G46160 LOC103839624 LOC103827751 LOC100241180 LOC121229379 LOC107905974 LOC107913806 LOC125578276 LOC106363404 LOC125589821 LOC102619758 LOC102608339 LOC102619048 LOC101260032 LOC102590369 LOC102592234 LOC107796434 LOC107783837 LOC4352797 LOC103629793 LOC100282366 LOC123042651 LOC123055114 LOC123110257 LOC123428425 LOC8084415 LOC100827819
Function* 50S ribosomal protein HLP, mitochondrial uncharacterized LOC100527495 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial Ribosomal protein L14p/L23e family protein 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial large ribosomal subunit protein uL14mz 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial large ribosomal subunit protein uL14mz 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial-like large ribosomal subunit protein uL14mz large ribosomal subunit protein uL14mz large ribosomal subunit protein uL14mz 50S ribosomal protein L14, mitochondrial-like Ribosomal protein L14p/L23e superfamily protein 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial-like 50S ribosomal protein HLP, mitochondrial 50S ribosomal protein HLP, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 9
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 8
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 10
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna04141 Protein processing in endoplasmic reticulum 3
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
bna00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 5
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03010 Ribosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma03040 Spliceosome 4
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
zma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae04145 Phagosome 2
tae03013 Nucleocytoplasmic transport 2
tae03015 mRNA surveillance pathway 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 7
sbi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
bdi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100818301 100527495 11433704 11442530 7475377 834658 103839624 103827751 100241180 121229379 107905974 107913806 125578276 106363404 125589821 102619758 102608339 102619048 101260032 102590369 102592234 107796434 107783837 4352797 103629793 100282366 123042651 123055114 123110257 123428425 8084415 100827819
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