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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   100818990   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 gma-r.7   100818990   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 gma-m.5   100818990   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 gma-u.5   100804632   NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like 
 mtr-u.5   11414639   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 ppo-u.5   18105605   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 ath-u.5   PYD1   pyrimidine 1 
 bra-r.6   103869649   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 bra-r.6   103839011   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 vvi-u.5   100249021   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 ghi-r.1   121206239   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 ghi-r.1   107890863   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 bna-r.1   106429281   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 bna-r.1   106347415   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 bna-r.1   106427199   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 cit-r.1   102610369   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 sly-u.5   PYD1A   putative dehydrogenase 
 sot-r.1   102599024   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 nta-r.1   107809767   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 nta-r.1   107809801   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like 
 osa-u.5   4330657   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 zma-u.5   100274265   uncharacterized LOC100274265 
 tae-r.2   123145434   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 tae-r.2   123138178   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 tae-r.2   123128329   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 hvu-r.1   123401718   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 sbi-r.1   8068612   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 bdi-r.1   100844077   dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic 
 cre-r.1   CHLRE_13g578750v5   uncharacterized protein 

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Top 50 coexpressed genes to 100818990 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 100818990 (gma-u.5 coexpression data)

CoexMap"100818990"


gmaLOC100818990 | Entrez gene ID : 100818990      
Species gma mtr ppo ath bra vvi ghi bna cit sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 1 1 2 1 2 3 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG gmx00240 [list] [network] Pyrimidine metabolism (120 genes)
gmx00410 [list] [network] beta-Alanine metabolism (94 genes)
gmx00770 [list] [network] Pantothenate and CoA biosynthesis (77 genes)
GO BP
GO:0006212 [list] [network] uracil catabolic process  (2 genes)  IEA  
GO:0006210 [list] [network] thymine catabolic process  (6 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (9233 genes)  IEA  
GO MF
GO:0002058 [list] [network] uracil binding  (2 genes)  IEA  
GO:0017113 [list] [network] dihydropyrimidine dehydrogenase (NADP+) activity  (2 genes)  IEA  
GO:0050661 [list] [network] NADP binding  (100 genes)  IEA  
Protein XP_003528976.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  cyto 1,  extr 1  (predict for XP_003528976.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_003528976.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
100818990
gma-r.7
for
100818990
gma-m.5
for
100818990
gma-u.5
for
100804632
mtr-u.5
for
11414639
ppo-u.5
for
18105605
ath-u.5
for
PYD1
bra-r.6
for
103869649
bra-r.6
for
103839011
vvi-u.5
for
100249021
ghi-r.1
for
121206239
ghi-r.1
for
107890863
bna-r.1
for
106429281
bna-r.1
for
106347415
bna-r.1
for
106427199
cit-r.1
for
102610369
sly-u.5
for
PYD1A
sot-r.1
for
102599024
nta-r.1
for
107809767
nta-r.1
for
107809801
osa-u.5
for
4330657
zma-u.5
for
100274265
tae-r.2
for
123145434
tae-r.2
for
123138178
tae-r.2
for
123128329
hvu-r.1
for
123401718
sbi-r.1
for
8068612
bdi-r.1
for
100844077
cre-r.1
for
CHLRE_13g578750v5


Ortholog ID: 8008
Species gma gma mtr ppo ath bra bra vvi ghi ghi bna bna bna cit sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC100818990 LOC100804632 LOC11414639 LOC18105605 PYD1 LOC103869649 LOC103839011 LOC100249021 LOC121206239 LOC107890863 LOC106429281 LOC106427199 LOC106452022 LOC102610369 PYD1A LOC102599024 LOC107809767 LOC107809801 LOC4330657 LOC100274265 LOC123145434 LOC123138178 LOC123128329 LOC123401718 LOC8068612 LOC100844077 CHLRE_13g578750v5
Function* dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic NAD-dependent dihydropyrimidine dehydrogenase subunit PreA-like dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic pyrimidine 1 dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic putative dehydrogenase dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic-like dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic uncharacterized LOC100274265 dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic dihydropyrimidine dehydrogenase (NADP(+)), chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00053 Ascorbate and aldarate metabolism 4
gma00240 Pyrimidine metabolism 2
gma00410 beta-Alanine metabolism 2
gma00770 Pantothenate and CoA biosynthesis 2
gma00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00240 Pyrimidine metabolism 2
gma00410 beta-Alanine metabolism 2
gma00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00280 Valine, leucine and isoleucine degradation 5
mtr01210 2-Oxocarboxylic acid metabolism 4
mtr00630 Glyoxylate and dicarboxylate metabolism 3
mtr01200 Carbon metabolism 3
mtr01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 3
ppo00410 beta-Alanine metabolism 2
ppo04142 Lysosome 2
ppo00250 Alanine, aspartate and glutamate metabolism 2
ppo00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00410 beta-Alanine metabolism 4
ath00240 Pyrimidine metabolism 3
ath00770 Pantothenate and CoA biosynthesis 3
ath00071 Fatty acid degradation 2
ath00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00071 Fatty acid degradation 5
bra00410 beta-Alanine metabolism 5
bra01212 Fatty acid metabolism 5
bra00592 alpha-Linolenic acid metabolism 4
bra01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00410 beta-Alanine metabolism 4
bra00071 Fatty acid degradation 4
bra01212 Fatty acid metabolism 4
bra00240 Pyrimidine metabolism 3
bra00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00071 Fatty acid degradation 3
vvi01212 Fatty acid metabolism 3
vvi00592 alpha-Linolenic acid metabolism 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00220 Arginine biosynthesis 3
ghi00250 Alanine, aspartate and glutamate metabolism 3
ghi00910 Nitrogen metabolism 3
ghi01200 Carbon metabolism 3
ghi00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi00240 Pyrimidine metabolism 2
ghi00410 beta-Alanine metabolism 2
ghi00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna00410 beta-Alanine metabolism 7
bna00770 Pantothenate and CoA biosynthesis 7
bna00052 Galactose metabolism 2
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna00410 beta-Alanine metabolism 7
bna00770 Pantothenate and CoA biosynthesis 7
bna00052 Galactose metabolism 2
bna00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 6
bna00410 beta-Alanine metabolism 6
bna00770 Pantothenate and CoA biosynthesis 6
bna00500 Starch and sucrose metabolism 4
bna00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00970 Aminoacyl-tRNA biosynthesis 3
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 6
sly04145 Phagosome 5
sly04142 Lysosome 2
sly00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01210 2-Oxocarboxylic acid metabolism 2
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00410 beta-Alanine metabolism 6
nta00770 Pantothenate and CoA biosynthesis 6
nta00240 Pyrimidine metabolism 4
nta04136 Autophagy - other 3
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00410 beta-Alanine metabolism 6
nta00770 Pantothenate and CoA biosynthesis 6
nta04136 Autophagy - other 4
nta00240 Pyrimidine metabolism 4
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00280 Valine, leucine and isoleucine degradation 6
osa00640 Propanoate metabolism 3
osa00410 beta-Alanine metabolism 2
osa01200 Carbon metabolism 2
osa00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 4
zma04145 Phagosome 4
zma00410 beta-Alanine metabolism 4
zma04148 Efferocytosis 3
zma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 8
tae00280 Valine, leucine and isoleucine degradation 6
tae01232 Nucleotide metabolism 5
tae01210 2-Oxocarboxylic acid metabolism 4
tae00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00240 Pyrimidine metabolism 3
tae00410 beta-Alanine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
tae00073 Cutin, suberine and wax biosynthesis 3
tae00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 7
tae00410 beta-Alanine metabolism 6
tae00640 Propanoate metabolism 5
tae00240 Pyrimidine metabolism 3
tae00770 Pantothenate and CoA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01210 2-Oxocarboxylic acid metabolism 3
hvu00071 Fatty acid degradation 2
hvu00010 Glycolysis / Gluconeogenesis 2
hvu00410 beta-Alanine metabolism 2
hvu00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sbi00270 Cysteine and methionine metabolism 3
sbi00350 Tyrosine metabolism 3
sbi00360 Phenylalanine metabolism 3
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 4
bdi01212 Fatty acid metabolism 4
bdi01240 Biosynthesis of cofactors 3
bdi01200 Carbon metabolism 3
bdi00240 Pyrimidine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00240 Pyrimidine metabolism 2
cre00410 beta-Alanine metabolism 2
cre00770 Pantothenate and CoA biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100818990 100804632 11414639 18105605 821049 103869649 103839011 100249021 121206239 107890863 106429281 106427199 106452022 102610369 543719 102599024 107809767 107809801 4330657 100274265 123145434 123138178 123128329 123401718 8068612 100844077 5719283
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