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Orthologous genes in OrthoFinder**

Species Gene Description
 gma-u.5   CYP53   peptidyl-prolyl cis-trans isomerase CYP53 
 gma-r.7   CYP53   peptidyl-prolyl cis-trans isomerase CYP53 
 gma-u.5   CYP60   peptidyl-prolyl cis-trans isomerase CYP60 
 mtr-u.5   25495180   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 ppo-u.5   18095299   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 ppo-u.5   18107279   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 ath-u.5   CYP38   cyclophilin 38 
 vvi-u.5   100262894   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 sly-u.5   101249229   peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic 
 osa-u.5   4345443   peptidyl-prolyl cis-trans isomerase, chloroplastic 
 zma-u.5   100285487   peptidyl-prolyl cis-trans isomerase 

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Top 50 coexpressed genes to CYP53 (gma-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to CYP53 (gma-u.5 coexpression data)

CoexMap"100819150"


gmaCYP53 | Entrez gene ID : 100819150      
Species gma mtr ppo ath vvi sly osa zma bdi hvu bra cit bna sbi ghi sot nta cre tae
Paralog 3 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000413 [list] [network] protein peptidyl-prolyl isomerization  (66 genes)  IEA  
GO CC
GO MF
GO:0003755 [list] [network] peptidyl-prolyl cis-trans isomerase activity  (112 genes)  IEA  
Protein NP_001344143.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1,  vacu 1,  E.R. 1,  E.R._vacu 1  (predict for NP_001344143.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_001344143.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

gma-u.5
for
CYP53
gma-r.7
for
CYP53
gma-u.5
for
CYP60
mtr-u.5
for
25495180
ppo-u.5
for
18095299
ppo-u.5
for
18107279
ath-u.5
for
CYP38
vvi-u.5
for
100262894
sly-u.5
for
101249229
osa-u.5
for
4345443
zma-u.5
for
100285487


Ortholog ID: 8465
Species gma gma mtr ppo ppo ath bra vvi ghi ghi bna bna cit sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol CYP53 CYP60 LOC25495180 LOC18107279 LOC18095299 CYP38 LOC103870984 LOC100262894 LOC107888646 LOC107958574 LOC125587607 LOC125609196 LOC102624093 LOC101249229 LOC102588177 LOC107786804 LOC107827288 LOC4345443 LOC100285487 LOC123154477 LOC123165340 LOC123407914 LOC8070008 LOC100824311 CHLRE_03g189800v5
Function* peptidyl-prolyl cis-trans isomerase CYP53 peptidyl-prolyl cis-trans isomerase CYP60 peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic cyclophilin 38 peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic-like peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic peptidyl-prolyl cis-trans isomerase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 4
gma01240 Biosynthesis of cofactors 4
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 6
gma00860 Porphyrin metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 4
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00860 Porphyrin metabolism 3
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
ppo00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 3
vvi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 13
bna03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 5
sly00860 Porphyrin metabolism 3
sly01240 Biosynthesis of cofactors 3
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 4
sot00860 Porphyrin metabolism 3
sot00195 Photosynthesis 2
sot00061 Fatty acid biosynthesis 2
sot01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00195 Photosynthesis 2
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 3
nta00500 Starch and sucrose metabolism 3
nta00999 Biosynthesis of various plant secondary metabolites 3
nta00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 5
zma00860 Porphyrin metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00630 Glyoxylate and dicarboxylate metabolism 3
bdi00710 Carbon fixation by Calvin cycle 3
bdi01200 Carbon metabolism 3
bdi03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 100819150 100809682 25495180 18107279 18095299 821137 103870984 100262894 107888646 107958574 125587607 125609196 102624093 101249229 102588177 107786804 107827288 4345443 100285487 123154477 123165340 123407914 8070008 100824311 5717510
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